RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 NDUFAF1Q9Y375 327 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 TRAPPC13A5PLN9 417 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 HIST1H2ABP04908 130 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 NAT2P11245 290 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 MTPNP58546 118 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 MELKQ14680 651 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 DEF8Q6ZN54 512 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 HIST3H2AQ7L7L0 130 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 RBM45Q8IUH3 476 aaKnown RBP19.91■□□□□ 0.78
COL27A1-208ENST00000494780 SLC30A7Q8NEW0 376 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 STON2Q8WXE9 905 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 HIST1H2ACQ93077 130 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 YIPF5Q969M3 257 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 SH3GL3Q99963 347 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 ZNF426Q9BUY5 554 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 ZNF416Q9BWM5 594 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 C1orf198Q9H425 327 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 GPR160Q9UJ42 338 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 SLC7A7Q9UM01 511 aa19.91■□□□□ 0.78
COL27A1-208ENST00000494780 NCR1O76036 304 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 VIMP08670 466 aaKnown RBP19.9■□□□□ 0.78
COL27A1-208ENST00000494780 PGA4P0DJD7 388 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 PGA3P0DJD8 388 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 SELENOVP59797 346 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 SELPLGQ14242 412 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 NKPD1Q17RQ9 610 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 NRN1LQ496H8 165 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 TMEM53Q6P2H8 277 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 LRRC17Q8N6Y2 441 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 OR4D11Q8NGI4 311 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 VANGL1Q8TAA9 524 aaPredicted RBP19.9■□□□□ 0.78
COL27A1-208ENST00000494780 DYDC1Q8WWB3 177 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 TMEM186Q96B77 213 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 PCDHAC1Q9H158 963 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 NARFLQ9H6Q4 476 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 RNF121Q9H920 327 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 CDH20Q9HBT6 801 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 HIF1ANQ9NWT6 349 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 GRIP1Q9Y3R0 1128 aa19.9■□□□□ 0.78
COL27A1-208ENST00000494780 A0A0A6YYJ9 748 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 FAM157AC9JC47 383 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 KPNA4O00629 521 aaPredicted RBP19.89■□□□□ 0.77
COL27A1-208ENST00000494780 ANGPT2O15123 496 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 PPIHO43447 177 aaKnown RBP19.89■□□□□ 0.77
COL27A1-208ENST00000494780 BCL10O95999 233 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 IGHG1P01857 330 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 MSMBP08118 114 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 QDPRP09417 244 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 ASAH2BP0C7U1 165 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 CD247P20963 164 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 PCGF2P35227 344 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 SLC36A2Q495M3 483 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 MMEL1Q495T6 779 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 NANOGNBQ7Z5D8 188 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 MEX3DQ86XN8 651 aaKnown RBP19.89■□□□□ 0.77
COL27A1-208ENST00000494780 OR4K5Q8NGD3 323 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 TSPEARQ8WU66 669 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 ATP6V1G3Q96LB4 118 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 KAT8Q9H7Z6 458 aaKnown RBP19.89■□□□□ 0.77
COL27A1-208ENST00000494780 TAAR3PQ9P1P4 343 aa19.89■□□□□ 0.77
COL27A1-208ENST00000494780 IGLV3-9A0A075B6K5 115 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 C17orf100A8MU93 164 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 WNT9BO14905 357 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 RP2O75695 350 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 SNAP29O95721 258 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 PTHP01270 115 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 FAM157BP0CG42 384 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 GAAP10253 952 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 UMPSP11172 480 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 ZNF250P15622 560 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 KLF3P57682 345 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-208ENST00000494780 HIST3H3Q16695 136 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 INTS11Q5TA45 600 aaKnown RBP19.88■□□□□ 0.77
COL27A1-208ENST00000494780 SLC16A14Q7RTX9 510 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 RETREG3Q86VR2 466 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 TSPYL5Q86VY4 417 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-208ENST00000494780 PAQR4Q8N4S7 273 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-208ENST00000494780 OR1J2Q8NGS2 313 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 OR51F2Q8NH61 342 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 SYNPRQ8TBG9 265 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 SLC26A7Q8TE54 656 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 TAMM41Q96BW9 452 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 OCEL1Q9H607 264 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 METTL17Q9H7H0 456 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-208ENST00000494780 HINT3Q9NQE9 182 aaKnown RBP19.88■□□□□ 0.77
COL27A1-208ENST00000494780 TREM2Q9NZC2 230 aa19.88■□□□□ 0.77
COL27A1-208ENST00000494780 CLPTM1O96005 669 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 CCL2P13500 99 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 MAGEB1P43366 347 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 ZNF84P51523 738 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 CLRN1P58418 232 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 LMO4P61968 165 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 SCGB2A2Q13296 93 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 NFYCQ13952 458 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 TBC1D28Q2M2D7 210 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 PCGF3Q3KNV8 242 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 ALKBH6Q3KRA9 238 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 TMEM154Q6P9G4 183 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 ZNF519Q8TB69 540 aa19.87■□□□□ 0.77
COL27A1-208ENST00000494780 SNX33Q8WV41 574 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms