RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 HIST1H1CP16403 213 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 NOS3P29474 1203 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 CDKN2AP42771 156 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 RAP1BP61224 184 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 RAP1AP62834 184 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 ARF1P84077 181 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 SORDQ00796 357 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 HIST3H3Q16695 136 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 HIKESHIQ53FT3 197 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 GPR139Q6DWJ6 353 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 RPL13AP3Q6NVV1 102 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 HDDC2Q7Z4H3 204 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 ABHD12BQ7Z5M8 362 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 NSMAFQ92636 917 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 MED18Q9BUE0 208 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 GABARAPL1Q9H0R8 117 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 B3GAT2Q9NPZ5 323 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 KRT84Q9NSB2 600 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 CRIM1Q9NZV1 1036 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 RPL36A-HNRNPH2H7BZ11 118 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 ANPEPP15144 967 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 KIR2DL3P43628 341 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 GABRA6Q16445 453 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 TMEM236Q5W0B7 351 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 FAM205BPQ63HN1 556 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 KDM4DQ6B0I6 523 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 STEAP2Q8NFT2 490 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 TEX47Q8TBZ9 253 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 NMD3Q96D46 503 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 NMNAT3Q96T66 252 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 HDHD5Q9BXW7 423 aa15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 TMEFF2Q9UIK5 374 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-208ENST00000493815 PRSS37A4D1T9 235 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 SH3D21A4FU49 640 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 EI24O14681 340 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 ARPC3O15145 178 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 TXNDC12O95881 172 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 APEHP13798 732 aaKnown RBP15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 CBR4Q8N4T8 237 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 ACBD4Q8NC06 268 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 SDR9C7Q8NEX9 313 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 OR2T33Q8NG76 320 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 OR1K1Q8NGR3 316 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 OR52N5Q8NH56 324 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 SYT4Q9H2B2 425 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 STX18Q9P2W9 335 aaKnown RBP15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 POFUT2Q9Y2G5 429 aa15.69■□□□□ 0.1
PDLIM7-208ENST00000493815 DCHS2Q6V1P9 2916 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 SLC22A23A1A5C7 686 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 ZNF99A8MXY4 864 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 DHHO43323 396 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 THBDP07204 575 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 B4GALT1P15291 398 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 IGFBP5P24593 272 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 EPHA2P29317 976 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 CDAP32320 146 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 PPP2R2BQ00005 443 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 TGFBR3Q03167 851 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 ETFDHQ16134 617 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 LEG1Q6P5S2 330 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 LNX2Q8N448 690 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 OR52E2Q8NGJ4 325 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 MUS81Q96NY9 551 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 FOXN4Q96NZ1 517 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 TSSK2Q96PF2 358 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 RBP7Q96R05 134 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 ALG12Q9BV10 488 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 OSBPL10Q9BXB5 764 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 NELFAQ9H3P2 528 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 FN3KQ9H479 309 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 RERGLQ9H628 205 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 NDRG3Q9UGV2 375 aa15.68■□□□□ 0.1
PDLIM7-208ENST00000493815 COX6B1P14854 86 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 POLR2IP36954 125 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 PCYT1AP49585 367 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 TUBA1BP68363 451 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 TUBA4AP68366 448 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 GINS1Q14691 196 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 TAB1Q15750 504 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 LRRC36Q1X8D7 754 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 PGGHGQ32M88 737 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 ACSM5Q6NUN0 579 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 KLHL24Q6TFL4 600 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 TUBA1AQ71U36 451 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 JAZF1Q86VZ6 243 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 CYB561A3Q8NBI2 242 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 BCL2L2Q92843 193 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 SLC29A1Q99808 456 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 RBM4BQ9BQ04 359 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 SPOCK3Q9BQ16 436 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 RBM4Q9BWF3 364 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 NKX1-2Q9UD57 310 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 PRR14LQ5THK1 2151 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 ANKHD1Q8IWZ3 2542 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 NBPF19A0A087WUL8 3843 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 OR5H1A6NKK0 313 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 CENPBD1B2RD01 187 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 H0YHG0 523 aa15.67■□□□□ 0.1
PDLIM7-208ENST00000493815 ALPLP05186 524 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms