RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 CSTL1Q9H114 145 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ANGPT4Q9Y264 503 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ZFP30Q9Y2G7 519 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 NUP210Q8TEM1 1887 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-205ENST00000493587 SERTM2A0A1B0GWG4 89 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 SLC5A10A0PJK1 596 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 MGAT4DA6NG13 374 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 UNC119BA6NIH7 251 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 NPIPA2E9PIF3 369 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 F6UZH7 168 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 DVL1O14640 695 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF208O43345 1280 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 HCRTO43612 131 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 ATP1B1P05026 303 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TBC1D3HP0C7X1 549 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TRGC1P0CF51 173 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 COX7A2P14406 83 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 AKR1A1P14550 325 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 PGAM2P15259 253 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 MAOAP21397 527 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 ALDH3B1P43353 468 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 POLR2HP52434 150 aaKnown RBP6.28□□□□□ -1.4
VPS13B-205ENST00000493587 DVL1P1P54792 670 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-205ENST00000493587 HTRA3P83110 453 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 MAPK14Q16539 360 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TTLL9Q3SXZ7 439 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TRIM61Q5EBN2 209 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TMEM69Q5SWH9 247 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 LYPLAL1Q5VWZ2 237 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 GLT6D1Q7Z4J2 308 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TMPRSS11BQ86T26 416 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 SERPINA11Q86U17 422 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 NKAIN3Q8N8D7 197 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 PLPP5Q8NEB5 264 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 PIGXQ8TBF5 258 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF596Q8TC21 504 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 PPP1R1CQ8WVI7 109 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 DNAJB3Q8WWF6 145 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 MALSU1Q96EH3 234 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TECTBQ96PL2 329 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 ATOH8Q96SQ7 321 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 CFHR5Q9BXR6 569 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 ASB8Q9H765 288 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TUBA4BQ9H853 241 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 IPPKQ9H8X2 491 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 CSNK1G1Q9HCP0 422 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TAS2R13Q9NYV9 303 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 FTSJ1Q9UET6 329 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TBC1D3DA0A087WVF3 549 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TBC1D3IA0A087WXS9 549 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TBC1D3EA0A087X179 549 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TMEM129A0AVI4 362 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 NKX6-3A6NJ46 265 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF727A8MUV8 499 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 HEPACAM2A8MVW5 462 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TBC1D3LB9A6J9 549 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 M0R296 226 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 OGG1O15527 345 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 OR1F1O43749 312 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 SCN2BO60939 215 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 RDH16O75452 317 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 CH25HO95992 272 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 C1QCP02747 245 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 IFNW1P05000 195 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 SLC2A5P22732 501 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 CD34P28906 385 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 CD1CP29017 333 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 ADORA2BP29275 332 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TAF6P49848 677 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 UCP3P55916 312 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 RIPPLY3P57055 190 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 RAB1AP62820 205 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 BTG2P78543 158 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 C17orf67Q0P5P2 114 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 CPSF6Q16630 551 aaKnown RBP eCLIP6.28□□□□□ -1.4
VPS13B-205ENST00000493587 PCGF3Q3KNV8 242 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 OR8G2PQ6IF36 304 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TBC1D3CQ6IPX1 549 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 KIRREL2Q6UWL6 708 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 FAM83HQ6ZRV2 1179 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-205ENST00000493587 ANGPTL5Q86XS5 388 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 CILP2Q8IUL8 1156 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 TBC1D3Q8IZP1 549 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-205ENST00000493587 OR5L1Q8NGL2 311 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 XAGE5Q8WWM1 108 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 SOCS4Q8WXH5 440 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 KCTD13Q8WZ19 329 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 CCDC74AQ96AQ1 378 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 GALNT14Q96FL9 552 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 MRGPRX3Q96LB0 322 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 SGCZQ96LD1 299 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 SLC6A18Q96N87 628 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 DERL2Q9GZP9 239 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 PDE7BQ9NP56 450 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 SPHK2Q9NRA0 654 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 ELOVL2Q9NXB9 296 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 AMDHD2Q9Y303 409 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 NEUROG3Q9Y4Z2 214 aa6.28□□□□□ -1.4
VPS13B-205ENST00000493587 BLACEA4D250 179 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 IDSB3KWA1 339 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms