RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 OR5AK2Q8NH90 309 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 CASTOR1Q8WTX7 329 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 SDF2Q99470 211 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 GGACTQ9BVM4 153 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 LGR4Q9BXB1 951 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 POTEKPQ9BYX7 375 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 ATG5Q9H1Y0 275 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 TM7SF3Q9NS93 570 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 SLC23A2Q9UGH3 650 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 IGKV1-8A0A0C4DH67 115 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 C13orf42A0A1B0GVH6 325 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 A0A1W2PPV9 198 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 C4orf47A7E2U8 309 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 GPR37O15354 613 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 ADAMTS4O75173 837 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 CSRP1P21291 193 aaKnown RBP10.64□□□□□ -0.71
HDAC4-210ENST00000493582 EIF2S3P41091 472 aaKnown RBP10.64□□□□□ -0.71
HDAC4-210ENST00000493582 HGFACQ04756 655 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 PRKCZQ05513 592 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 ELAVL2Q12926 359 aaKnown RBP10.64□□□□□ -0.71
HDAC4-210ENST00000493582 IRF4Q15306 451 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 TMEM205Q6UW68 189 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 CD163Q86VB7 1156 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 OR4N5Q8IXE1 308 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 OR4K17Q8NGC6 315 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 TCTEX1D2Q8WW35 142 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 TMEM106AQ96A25 262 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 TMEM41AQ96HV5 264 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 PTCHD1Q96NR3 888 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 LMF1Q96S06 567 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 SEC61A2Q9H9S3 476 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 OR2S2Q9NQN1 319 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 PRDM7Q9NQW5 492 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 hCG_1809904A0A1W2PP81 198 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 A0A1W2PR64 198 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 A0A1W2PRV1 198 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 LRRC72A6NJI9 287 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 NRG2O14511 850 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-210ENST00000493582 RDH16O75452 317 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 RCC1P18754 421 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-210ENST00000493582 CD80P33681 288 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 GPR1P46091 355 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 SNRPNP63162 240 aaKnown RBP10.64□□□□□ -0.71
HDAC4-210ENST00000493582 DEFA6Q01524 100 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF124Q15973 351 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 C2orf76Q3KRA6 126 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 OR10K2Q6IF99 312 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 ADAM5Q6NVV9 412 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 DCUN1D4Q92564 292 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 EDAQ92838 391 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 RRNAD1Q96FB5 475 aaKnown RBP10.64□□□□□ -0.71
HDAC4-210ENST00000493582 TRMT2BQ96GJ1 504 aaKnown RBP10.64□□□□□ -0.71
HDAC4-210ENST00000493582 RHOVQ96L33 236 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF681Q96N22 645 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 SLC25A21Q9BQT8 299 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-210ENST00000493582 XKR8Q9H6D3 395 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 CHRNA9Q9UGM1 479 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 CSAG2Q9Y5P2 127 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF780BQ9Y6R6 833 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 HTTP42858 3142 aa10.64□□□□□ -0.71
HDAC4-210ENST00000493582 ARID1BQ8NFD5 2236 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-210ENST00000493582 C17orf113A0A1B0GUU1 675 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 TMEM72A0PK05 275 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 DUXAA6NLW8 204 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 IGHV2-5P01817 119 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 ITGA5P08648 1049 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 SRSF4Q08170 494 aaKnown RBP10.63□□□□□ -0.71
HDAC4-210ENST00000493582 DUSP8Q13202 625 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 PPP1R1AQ13522 171 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 CDPF1Q6NVV7 123 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 TMPPEQ6ZT21 453 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 ABHD13Q7L211 337 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 FAM219AQ8IW50 185 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 DMRTC2Q8IXT2 367 aaPredicted RBP10.63□□□□□ -0.71
HDAC4-210ENST00000493582 BPIFB2Q8N4F0 458 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 LINC01555Q8NAE3 123 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 SLC30A7Q8NEW0 376 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 OR4S1Q8NGB4 309 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 GPX8Q8TED1 209 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 MS4A6EQ96DS6 147 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 SEH1LQ96EE3 360 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 AKR1E2Q96JD6 320 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 TSSK2Q96PF2 358 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 SLC6A7Q99884 636 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 DPEP2Q9H4A9 486 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 EPHX3Q9H6B9 360 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 SCN2AQ99250 2005 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 PLXNA2O75051 1894 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 RPLP2P05387 115 aaKnown RBP10.63□□□□□ -0.71
HDAC4-210ENST00000493582 CD1CP29017 333 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 RPL4P36578 427 aaKnown RBP10.63□□□□□ -0.71
HDAC4-210ENST00000493582 TAS2R19P59542 299 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 CLINT1Q14677 625 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 TMEM215Q68D42 235 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF627Q7L945 461 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 OR13C8Q8NGS7 320 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 OR2L2Q8NH16 312 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 CCDC74AQ96AQ1 378 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 FOXRED1Q96CU9 486 aaPredicted RBP10.63□□□□□ -0.71
HDAC4-210ENST00000493582 CST11Q9H112 138 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms