RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 MEX3DQ86XN8 651 aaKnown RBP9.96□□□□□ -0.82
COL6A3-213ENST00000493475 C1orf174Q8IYL3 243 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 SLC22A24Q8N4F4 322 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 SLC30A7Q8NEW0 376 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 ZNF837Q96EG3 531 aaPredicted RBP9.96□□□□□ -0.82
COL6A3-213ENST00000493475 SLC25A44Q96H78 314 aaPredicted RBP9.96□□□□□ -0.82
COL6A3-213ENST00000493475 MCHR1Q99705 422 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 METTL17Q9H7H0 456 aaPredicted RBP9.96□□□□□ -0.82
COL6A3-213ENST00000493475 SLCO1B3Q9NPD5 702 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 SLC52A3Q9NQ40 469 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 MRGBPQ9NV56 204 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 HIF1ANQ9NWT6 349 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 LEF1Q9UJU2 399 aaPredicted RBP9.96□□□□□ -0.82
COL6A3-213ENST00000493475 ZNF229Q9UJW7 825 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 A0A1W2PRG6 482 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 PLSCR5A0PG75 271 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 TRIM77I1YAP6 450 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 LCKP06239 509 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 HLA-DOBP13765 273 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 ITGA2P17301 1181 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 TCN1P20061 433 aaPredicted RBP9.95□□□□□ -0.82
COL6A3-213ENST00000493475 CD247P20963 164 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 IFNA8P32881 189 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 APLNRP35414 380 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 AQP5P55064 265 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 MYBPC1Q00872 1141 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 HSF2Q03933 536 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 SLC3A1Q07837 685 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 RAB39AQ14964 217 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 TRIP10Q15642 601 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 NPTX1Q15818 432 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 DEF8Q6ZN54 512 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 SLC16A14Q7RTX9 510 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 MAVSQ7Z434 540 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 RBM15BQ8NDT2 890 aaKnown RBP9.95□□□□□ -0.82
COL6A3-213ENST00000493475 ZNF519Q8TB69 540 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 SYNPRQ8TBG9 265 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 NARFLQ9H6Q4 476 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 HINT3Q9NQE9 182 aaKnown RBP9.95□□□□□ -0.82
COL6A3-213ENST00000493475 SLC25A37Q9NYZ2 338 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 VAPAQ9P0L0 249 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 EIF3KQ9UBQ5 218 aaKnown RBP9.95□□□□□ -0.82
COL6A3-213ENST00000493475 NDUFAF1Q9Y375 327 aa9.95□□□□□ -0.82
COL6A3-213ENST00000493475 MALRD1Q5VYJ5 2156 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 A0A0G2JMP0 313 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 A0A0X1KG70 313 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 TRAPPC13A5PLN9 417 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 ZNF503-AS2A6NEH8 195 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 CENPBD1B2RD01 187 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 CLDN25C9JDP6 229 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 DHHO43323 396 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 TPST1O60507 370 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 MFN2O95140 757 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 SNAP29O95721 258 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 PNPP00491 289 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 HPRP00739 348 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 GAAP10253 952 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 GCH1P30793 250 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 IL2RGP31785 369 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 LIMS1P48059 325 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 IDH3AP50213 366 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 ZP4Q12836 540 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 ZNF74Q16587 644 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 FXNQ16595 210 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 HFEQ30201 348 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 ZMAT1Q5H9K5 638 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 ENTPD8Q5MY95 495 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 ELFN2Q5R3F8 820 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 PHYHD1Q5SRE7 291 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 ACSM5Q6NUN0 579 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 FAHD2BQ6P2I3 314 aaPredicted RBP9.94□□□□□ -0.82
COL6A3-213ENST00000493475 DHDDSQ86SQ9 333 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 PEG10Q86TG7 708 aaKnown RBP9.94□□□□□ -0.82
COL6A3-213ENST00000493475 SMYD1Q8NB12 490 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 ICA1LQ8NDH6 482 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 OR4M2Q8NGB6 313 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 CLDND2Q8NHS1 167 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 RAB1CQ92928 201 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 TMEM54Q969K7 222 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 ZBTB9Q96C00 473 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 FAHD2AQ96GK7 314 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 TXNDC15Q96J42 360 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 MOGAT1Q96PD6 335 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 LRRC37BQ96QE4 947 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 SH3GL1Q99961 368 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 SOX7Q9BT81 388 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 EGLN1Q9GZT9 426 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 TMBIM4Q9HC24 238 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 CCNB1IP1Q9NPC3 277 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 ZNF275Q9NSD4 429 aaPredicted RBP9.94□□□□□ -0.82
COL6A3-213ENST00000493475 TMEM38BQ9NVV0 291 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 NKIRAS2Q9NYR9 191 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 TAAR3PQ9P1P4 343 aa9.94□□□□□ -0.82
COL6A3-213ENST00000493475 CPSF4LA6NMK7 179 aaKnown RBP9.93□□□□□ -0.82
COL6A3-213ENST00000493475 C17orf100A8MU93 164 aa9.93□□□□□ -0.82
COL6A3-213ENST00000493475 LYNX1G3V0Z9 82 aa9.93□□□□□ -0.82
COL6A3-213ENST00000493475 J3QLI3 93 aa9.93□□□□□ -0.82
COL6A3-213ENST00000493475 CH25HO95992 272 aa9.93□□□□□ -0.82
COL6A3-213ENST00000493475 IFNA14P01570 189 aa9.93□□□□□ -0.82
COL6A3-213ENST00000493475 HPXP02790 462 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms