RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ZNF708P17019 499 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 HTR1FP30939 366 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 ACVR1BP36896 505 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 EIF1AXP47813 144 aaKnown RBP12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 MTNR1AP48039 350 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 AGFG1P52594 562 aaKnown RBP12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 CLDN18P56856 261 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 RPS3AP61247 264 aaKnown RBP12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 KLHL12Q53G59 568 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 SLC35D2Q76EJ3 337 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 GPAT4Q86UL3 456 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 UEVLDQ8IX04 471 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 RBMXL3Q8N7X1 1067 aaKnown RBP12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 ZBTB8BQ8NAP8 495 aaPredicted RBP12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 KBTBD8Q8NFY9 601 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF519Q8TB69 540 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 OXGR1Q96P68 337 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 DDOQ99489 341 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 SRXN1Q9BYN0 137 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 OR51V1Q9H2C8 321 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 NPIPA1Q9UND3 350 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 RASD1Q9Y272 281 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 LIPGQ9Y5X9 500 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 CACNA1GO43497 2377 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 OR6C68A6NDL8 312 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 SLC22A31A6NKX4 558 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 ARHGEF9O43307 516 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 CXCL13O43927 109 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 VAMP5O95183 116 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 RENP00797 406 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 ZNF43P17038 809 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 SLC16A1P53985 500 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 CLDN15P56746 228 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 RPS7P62081 194 aaKnown RBP12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 C1DQ13901 141 aaKnown RBP12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 MELKQ14680 651 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 BCL2A1Q16548 175 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 KLHL22Q53GT1 634 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 ARMCX4Q5H9R4 360 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 ARMC4Q5T2S8 1044 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 FAM205BPQ63HN1 556 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 PLEKHG7Q6ZR37 379 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 MEPCEQ7L2J0 689 aaKnown RBP12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 SNX29P2Q8IUI4 249 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 GHDCQ8N2G8 530 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 MEIOBQ8N635 442 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 OR9Q1Q8NGQ5 310 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 ZPLD1Q8TCW7 415 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 CPNE4Q96A23 557 aaPredicted RBP12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 RNFT2Q96EX2 444 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 MRPS18AQ9NVS2 196 aaKnown RBP12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 LHX6Q9UPM6 363 aa12.58□□□□□ -0.4
PDZRN3-210ENST00000492909 KMT2BQ9UMN6 2715 aaPredicted RBP12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 IRGMA1A4Y4 181 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 A6NIZ1 184 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 RAMP1O60894 148 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 IGHG3P01860 377 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 GYPBP06028 91 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 CLUP10909 449 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 KLK2P20151 261 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 ENPP1P22413 925 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 SLC2A5P22732 501 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 RGS6P49758 472 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 RAP1BP61224 184 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 RAP1AP62834 184 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 SRYQ05066 204 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 LGALS3BPQ08380 585 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 RAB40BQ12829 278 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 VASNQ6EMK4 673 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 ASB10Q8WXI3 467 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 SNX18Q96RF0 628 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 UCN2Q96RP3 112 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 TEAD3Q99594 435 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 NMNAT2Q9BZQ4 307 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 OR51E2Q9H255 320 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 RPRD1BQ9NQG5 326 aaKnown RBP12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 MED29Q9NX70 200 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 TP53TG5Q9Y2B4 290 aa12.57□□□□□ -0.4
PDZRN3-210ENST00000492909 IGHV3-15A0A0B4J1V0 119 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 ISPDA4D126 451 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 PRSS37A4D1T9 235 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 H7C1C5 153 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 SMAD9O15198 467 aaKnown RBP12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 TRAF3IP2O43734 574 aaPredicted RBP12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 SLC25A1P53007 311 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 LCN6P62502 163 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 RPUSD3Q6P087 351 aaKnown RBP12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 HDDC2Q7Z4H3 204 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 TMEM80Q96HE8 168 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 TXNDC15Q96J42 360 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 TAAR6Q96RI8 345 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 ARHGAP9Q9BRR9 750 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 TSPAN10Q9H1Z9 355 aaPredicted RBP12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 SYT4Q9H2B2 425 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 ASB6Q9NWX5 421 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 PAQR5Q9NXK6 330 aaPredicted RBP12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 KLHL13Q9P2N7 655 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 UPK1BO75841 260 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 SPI1P17947 270 aa12.56□□□□□ -0.4
PDZRN3-210ENST00000492909 ATP6V1E1P36543 226 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms