RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 RCN1Q15293 331 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 SGCAQ16586 387 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 SPANXN2Q5MJ10 180 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 FRMPD2BQ6IN97 320 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLC8B1Q6J4K2 584 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 LCN12Q6JVE5 192 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 ZNF836Q6ZNA1 936 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 TMEM135Q86UB9 458 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 ZNF429Q86V71 674 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 THOC6Q86W42 341 aaKnown RBP1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 ARIH2OSQ8N7S6 290 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 Q8N9W7 124 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR4F15Q8NGB8 312 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR52K2Q8NGK3 314 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR2G3Q8NGZ4 309 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 ACMSDQ8TDX5 336 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLC38A4Q969I6 547 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 TMEM54Q969K7 222 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 SGK3Q96BR1 496 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 MED8Q96G25 268 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 ATP5SQ99766 215 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLC25A39Q9BZJ4 359 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 FAM192AQ9GZU8 254 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 NEUROG2Q9H2A3 272 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 TMEM185BQ9H7F4 350 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 NEK6Q9HC98 313 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 ZNF160Q9HCG1 818 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 RBAKQ9NYW8 714 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 GNPTGQ9UJJ9 305 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 PACSIN2Q9UNF0 486 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 WSB1Q9Y6I7 421 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 CNTNAP1P78357 1384 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 TRBV6-6A0A0A6YYG2 114 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 A0A1B0GVI7 797 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 SMCO3A2RU48 225 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 PEX7O00628 323 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 DYNC1I1O14576 645 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 RAB29O14966 203 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 CHST1O43916 411 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 CDH16O75309 829 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 EEDO75530 441 aaKnown RBP1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR2J3O76001 311 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 CLPXO76031 633 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 FTH1P02794 183 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 CSF3P09919 207 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 SFTPCP11686 197 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 FOLR1P15328 257 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 HPGDP15428 266 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 GALP22466 123 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 CCNCP24863 283 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 RORCP51449 518 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 SSR4P51571 173 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 CCR6P51684 374 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 CCR8P51685 355 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 PRRX1P54821 245 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 YWHAGP61981 247 aaKnown RBP eCLIP1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 RPS15P62841 145 aaKnown RBP1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 GUCA2BQ16661 112 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 ALKBH6Q3KRA9 238 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 TMEM255AQ5JRV8 349 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 LY6G6FQ5SQ64 297 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 CCDC73Q6ZRK6 1079 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 PDIK1LQ8N165 341 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 EID2Q8N6I1 236 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 Q8N9L7 120 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 MDS2Q8NDY4 140 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 FBXL13Q8NEE6 735 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR4C5Q8NGB2 326 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 DTX3LQ8TDB6 740 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 SDR42E1Q8WUS8 393 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 MCUR1Q96AQ8 359 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 ZNF578Q96N58 590 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 PANX1Q96RD7 426 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 TGS1Q96RS0 853 aaKnown RBP1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 CHP1Q99653 195 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLC29A1Q99808 456 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 ECSITQ9BQ95 431 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 DNTTIP1Q9H147 329 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR51M1Q9H341 326 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 FGF20Q9NP95 211 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 DMAP1Q9NPF5 467 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLC25A37Q9NYZ2 338 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 NUFIP1Q9UHK0 495 aaKnown RBP1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 PITPNC1Q9UKF7 332 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 MSH6P52701 1360 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 NINLQ9Y2I6 1382 aa1.79□□□□□ -2.12
HMGB1P30-201ENST00000492455 PIKFYVEQ9Y2I7 2098 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 MAP3K15Q6ZN16 1313 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 A0A0B4J2A0 478 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 TRBV11-1A0A0K0K1C0 115 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 NKX2-6A6NCS4 301 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 PPP1R2P9O14990 202 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 MRPS12O15235 138 aaKnown RBP1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 CLOCKO15516 846 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 KLHL41O60662 606 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 SS18L1O75177 396 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 CA11O75493 328 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR2F2O95006 317 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 FGF4P08620 206 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 ANXA5P08758 320 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms