RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 ACADSP16219 412 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 ZNF14P17017 642 aaPredicted RBP21.39■■□□□ 1.01
UPF3A-209ENST00000492270 PTDSS1P48651 473 aaKnown RBP21.39■■□□□ 1.01
UPF3A-209ENST00000492270 DAP3P51398 398 aaKnown RBP21.39■■□□□ 1.01
UPF3A-209ENST00000492270 TOP3AQ13472 1001 aaPredicted RBP21.39■■□□□ 1.01
UPF3A-209ENST00000492270 FHL1Q13642 323 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 ETFDHQ16134 617 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 FXNQ16595 210 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 CLEC9AQ6UXN8 241 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 SLC22A24Q8N4F4 322 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 ANKS4BQ8N8V4 417 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 OR13C2Q8NGS9 318 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 OR51A7Q8NH64 312 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 MCHR2Q969V1 340 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 NDUFAF4Q9P032 175 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 CD300AQ9UGN4 299 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 SAMD4AQ9UPU9 718 aaKnown RBP21.39■■□□□ 1.01
UPF3A-209ENST00000492270 NSD1Q96L73 2696 aaPredicted RBP21.39■■□□□ 1.01
UPF3A-209ENST00000492270 SSX4O60224 188 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 DIRAS1O95057 198 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 LY6G6DO95868 133 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 GPR4P46093 362 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 GIPRP48546 466 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 VLDLRP98155 873 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 ADIPOQQ15848 244 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 SWI5Q1ZZU3 235 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 DNM1P46Q6ZS02 220 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 MBOAT2Q6ZWT7 520 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 PIWIL3Q7Z3Z3 882 aaKnown RBP21.38■■□□□ 1.01
UPF3A-209ENST00000492270 CYP4Z1Q86W10 505 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 FITM2Q8N6M3 262 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 LRRC75AQ8NAA5 344 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 NANOS1Q8WY41 292 aaKnown RBP21.38■■□□□ 1.01
UPF3A-209ENST00000492270 HDAC2Q92769 488 aaKnown RBP21.38■■□□□ 1.01
UPF3A-209ENST00000492270 C7orf34Q96L11 122 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 SH3GL3Q99963 347 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 TXNIPQ9H3M7 391 aa21.38■■□□□ 1.01
UPF3A-209ENST00000492270 HTR3EA5X5Y0 456 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 EFCAB9A8MZ26 197 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 H7C417 338 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 CDC42EP2O14613 210 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 GMNNO75496 209 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 SLC2A10O95528 541 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 RAB1AP62820 205 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 MXRA7P84157 204 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 CHRNB3Q05901 458 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 FMODQ06828 376 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 SAMD4BQ5PRF9 694 aaKnown RBP21.37■■□□□ 1.01
UPF3A-209ENST00000492270 DEFB107AQ8IZN7 70 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 RNF113BQ8IZP6 322 aaKnown RBP21.37■■□□□ 1.01
UPF3A-209ENST00000492270 MAPK1IP1LQ8NDC0 245 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 OR4F15Q8NGB8 312 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 OR4K5Q8NGD3 323 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 SLC7A13Q8TCU3 470 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 TNFRSF13CQ96RJ3 184 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 GORASP2Q9H8Y8 452 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 BARX1Q9HBU1 254 aaPredicted RBP21.37■■□□□ 1.01
UPF3A-209ENST00000492270 MAGEL2Q9UJ55 1249 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 TLN2Q9Y4G6 2542 aa21.37■■□□□ 1.01
UPF3A-209ENST00000492270 IGKV1D-43A0A0B4J1Z2 117 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 NPIPB13A6NJU9 1138 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 NPIPB4C9JG80 1138 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 RNF223E7ERA6 249 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 ARPC2O15144 300 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 UBL3O95164 117 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 H1F0P07305 194 aaKnown RBP21.36■■□□□ 1.01
UPF3A-209ENST00000492270 OR4A8P0C604 315 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 THBS4P35443 961 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 NUDT6P53370 316 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 CTXN1P60606 82 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 RAB35Q15286 201 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 KRT80Q6KB66 452 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 PODNL1Q6PEZ8 512 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 C16orf89Q6UX73 402 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 HDDC2Q7Z4H3 204 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 OAFQ86UD1 273 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 CLDN22Q8N7P3 220 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 NUP37Q8NFH4 326 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 NMD3Q96D46 503 aaKnown RBP21.36■■□□□ 1.01
UPF3A-209ENST00000492270 TSPAN32Q96QS1 320 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 ANKRD19PQ9H560 264 aa21.36■■□□□ 1.01
UPF3A-209ENST00000492270 ZNF346Q9UL40 294 aaKnown RBP21.36■■□□□ 1.01
UPF3A-209ENST00000492270 CENPBD1B2RD01 187 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 RAB36O95755 333 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 IGHMP01871 453 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 SEMG1P04279 462 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 OR8G3PP0DMU2 310 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 SERPINF1P36955 418 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 SNTB2Q13425 540 aaKnown RBP21.35■■□□□ 1.01
UPF3A-209ENST00000492270 RAB39AQ14964 217 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 IQCCQ4KMZ1 466 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 FGD3Q5JSP0 725 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 ZNF584Q8IVC4 421 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 FAM46AQ96IP4 442 aaKnown RBP21.35■■□□□ 1.01
UPF3A-209ENST00000492270 KCNK17Q96T54 332 aa21.35■■□□□ 1.01
UPF3A-209ENST00000492270 FAM32AQ9Y421 112 aaKnown RBP21.35■■□□□ 1.01
UPF3A-209ENST00000492270 TRBV4-1A0A0J9YWV2 114 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 LY6HO94772 140 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 FAM107AO95990 144 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 HEXAP06865 529 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms