RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 EGFP01133 1207 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 RLN2P04090 185 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 RAB40ALP0C0E4 278 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 NAT1P18440 290 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 PBX2P40425 430 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 RAG2P55895 527 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 RPL18Q07020 188 aaKnown RBP10.13□□□□□ -0.79
VPS72-205ENST00000491094 ATRAIDQ6UW56 229 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 ZNF546Q86UE3 836 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 BAHD1Q8TBE0 780 aaPredicted RBP10.13□□□□□ -0.79
VPS72-205ENST00000491094 GPR148Q8TDV2 347 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 RAB40AQ8WXH6 277 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 FBXL21Q9UKT6 434 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 KCNMB2Q9Y691 235 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 UNC13CQ8NB66 2214 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 C2orf72A6NCS6 295 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 K7EQS6 105 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 PPM1BO75688 479 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 VAMP1P23763 118 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 TACR3P29371 465 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 PSMD4P55036 377 aaKnown RBP10.13□□□□□ -0.79
VPS72-205ENST00000491094 RBMS2Q15434 407 aaKnown RBP10.13□□□□□ -0.79
VPS72-205ENST00000491094 PRAMEF17Q5VTA0 474 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 ZNF626Q68DY1 528 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 ADGRG3Q86Y34 549 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 BEST3Q8N1M1 668 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 OR4S1Q8NGB4 309 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 GAS2L1Q99501 681 aaPredicted RBP10.13□□□□□ -0.79
VPS72-205ENST00000491094 TINAGL1Q9GZM7 467 aaPredicted RBP10.13□□□□□ -0.79
VPS72-205ENST00000491094 OR10A5Q9H207 317 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 LYRM4Q9HD34 91 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 LINC01565O15544 149 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 SLC16A7O60669 478 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 RAB3DO95716 219 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 HOXD4P09016 255 aaPredicted RBP10.13□□□□□ -0.79
VPS72-205ENST00000491094 HHEXQ03014 270 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 NHLRC3Q5JS37 347 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 LINC01590Q5TEZ4 76 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 KRT77Q7Z794 578 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 MCATQ8IVS2 390 aaKnown RBP10.13□□□□□ -0.79
VPS72-205ENST00000491094 METTL21AQ8WXB1 218 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 WNT2BQ93097 391 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 CCDC74AQ96AQ1 378 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 OPN4Q9UHM6 478 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 RWDD3Q9Y3V2 267 aa10.13□□□□□ -0.79
VPS72-205ENST00000491094 CDC40O60508 579 aaKnown RBP eCLIP10.12□□□□□ -0.79
VPS72-205ENST00000491094 GLSO94925 669 aaPredicted RBP10.12□□□□□ -0.79
VPS72-205ENST00000491094 RENP00797 406 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 OR1D4P47884 311 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 FOXL2P58012 376 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 GK2Q14410 553 aaPredicted RBP10.12□□□□□ -0.79
VPS72-205ENST00000491094 GLYATL3Q5SZD4 288 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 SEZ6L2Q6UXD5 910 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 RHOUQ7L0Q8 258 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 ACBD4Q8NC06 268 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 FAM71CQ8NEG0 241 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 FAM3DQ96BQ1 224 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 POFUT1Q9H488 388 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 C13orf42A0A1B0GVH6 325 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 SCDO00767 359 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 ITGA5P08648 1049 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 RNH1P13489 461 aaKnown RBP10.12□□□□□ -0.79
VPS72-205ENST00000491094 FCARP24071 287 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 PRPS1P60891 318 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 TOMM34Q15785 309 aaPredicted RBP10.12□□□□□ -0.79
VPS72-205ENST00000491094 AKIRIN2Q53H80 203 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 STEAP1BQ6NZ63 245 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 UNQ9370/PRO34162Q6UXP9 181 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 GPAT4Q86UL3 456 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 FLVCR1-AS1Q8TAF5 88 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 RADILQ96JH8 1075 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 MAP3K3Q99759 626 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 MRTO4Q9UKD2 239 aaKnown RBP10.12□□□□□ -0.79
VPS72-205ENST00000491094 MRPS33Q9Y291 106 aaKnown RBP10.12□□□□□ -0.79
VPS72-205ENST00000491094 A0A0J9YY10 115 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 EEF1E1-BLOC1S5C9J1V9 151 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 SDC3O75056 442 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 MPZL1O95297 269 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 OPN1LWP04000 364 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 CT45A8P0DMV1 189 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 CT45A9P0DMV2 189 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 CXCR1P25024 350 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 RAB38P57729 211 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 CT45A2Q5DJT8 189 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 SHISA6Q6ZSJ9 500 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 SLC16A9Q7RTY1 509 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 ZNF524Q96C55 264 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 KLHL15Q96M94 604 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 ICAM5Q9UMF0 924 aa10.12□□□□□ -0.79
VPS72-205ENST00000491094 FREM3P0C091 2139 aa10.11□□□□□ -0.79
VPS72-205ENST00000491094 SLC22A23A1A5C7 686 aa10.11□□□□□ -0.79
VPS72-205ENST00000491094 GGT3PA6NGU5 568 aa10.11□□□□□ -0.79
VPS72-205ENST00000491094 UPK3AO75631 287 aa10.11□□□□□ -0.79
VPS72-205ENST00000491094 PPP3CBP16298 524 aa10.11□□□□□ -0.79
VPS72-205ENST00000491094 MAPK3P27361 379 aaPredicted RBP10.11□□□□□ -0.79
VPS72-205ENST00000491094 GNALP38405 381 aa10.11□□□□□ -0.79
VPS72-205ENST00000491094 RBM34P42696 430 aaKnown RBP10.11□□□□□ -0.79
VPS72-205ENST00000491094 WDR38Q5JTN6 314 aa10.11□□□□□ -0.79
VPS72-205ENST00000491094 SLC51BQ86UW2 128 aa10.11□□□□□ -0.79
VPS72-205ENST00000491094 CMIPQ8IY22 773 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms