RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CNOT4O95628 575 aaKnown RBP16.47■□□□□ 0.23
MCF2L-230ENST00000491028 CLIC3O95833 236 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 ZNF133P52736 654 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-230ENST00000491028 SLC25A1P53007 311 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 LCN6P62502 163 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 IL5RAQ01344 420 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 STK11Q15831 433 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 CXXC5Q7LFL8 322 aaKnown RBP16.47■□□□□ 0.23
MCF2L-230ENST00000491028 ABHD12BQ7Z5M8 362 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-230ENST00000491028 GPR137CQ8N3F9 429 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 SYT14Q8NB59 555 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 CYB561A3Q8NBI2 242 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 PRR7Q8TB68 274 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 NMD3Q96D46 503 aaKnown RBP16.47■□□□□ 0.23
MCF2L-230ENST00000491028 STARD4Q96DR4 205 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 IL4I1Q96RQ9 567 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 NMNAT2Q9BZQ4 307 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 SYT4Q9H2B2 425 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 PIGMQ9H3S5 423 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 HINT3Q9NQE9 182 aaKnown RBP16.47■□□□□ 0.23
MCF2L-230ENST00000491028 ZNF226Q9NYT6 803 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 MALT1Q9UDY8 824 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 RNF6Q9Y252 685 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 GPR52Q9Y2T5 361 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 FKBP7Q9Y680 259 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 CFAP46Q8IYW2 2715 aa16.47■□□□□ 0.23
MCF2L-230ENST00000491028 M0R129 80 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 CGAP01215 116 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 GNAO1P09471 354 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 GABRB1P18505 474 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 MYF6P23409 242 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 CRABP1P29762 137 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 TEKQ02763 1124 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 SLC25A30Q5SVS4 291 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 TSPO2Q5TGU0 170 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 MEDAGQ5VYS4 303 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 NXNL2Q5VZ03 156 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 FBXW9Q5XUX1 488 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 NCCRP1Q6ZVX7 275 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-230ENST00000491028 BTLAQ7Z6A9 289 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 FJX1Q86VR8 437 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 FAM26EQ8N5C1 309 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 OR2T4Q8NH00 348 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 RHOXF1Q8NHV9 184 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 ULBP2Q9BZM5 246 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 RPRD1BQ9NQG5 326 aaKnown RBP16.46■□□□□ 0.23
MCF2L-230ENST00000491028 SLC7A10Q9NS82 523 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 UPB1Q9UBR1 384 aa16.46■□□□□ 0.23
MCF2L-230ENST00000491028 FASNP49327 2511 aaKnown RBP16.46■□□□□ 0.22
MCF2L-230ENST00000491028 FAM183AA6NL82 134 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 RPL36A-HNRNPH2H7BZ11 118 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 DVL2O14641 736 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 PRODHO43272 600 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 DENRO43583 198 aaKnown RBP16.45■□□□□ 0.22
MCF2L-230ENST00000491028 UPK3AO75631 287 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 KRT33AO76009 404 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 QDPRP09417 244 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 EDNRAP25101 427 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 ISL1P61371 349 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 FMODQ06828 376 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 MAD2L1BPQ15013 274 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-230ENST00000491028 OCLNQ16625 522 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 C10orf128Q5T292 105 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 AADACL4Q5VUY2 407 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 PLBD1Q6P4A8 553 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 SLC25A47Q6Q0C1 308 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.45■□□□□ 0.22
MCF2L-230ENST00000491028 THAP5Q7Z6K1 395 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 ZBTB46Q86UZ6 589 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 CPOQ8IVL8 374 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 GID4Q8IVV7 300 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 MCHR2Q969V1 340 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 ALKBH3Q96Q83 286 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-230ENST00000491028 NUAK2Q9H093 628 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 RACGAP1Q9H0H5 632 aa16.45■□□□□ 0.22
MCF2L-230ENST00000491028 ZNF587BE7ETH6 402 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 LRRTM2O43300 516 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 DHHO43323 396 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 SLC16A7O60669 478 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 KHDRBS3O75525 346 aaKnown RBP16.44■□□□□ 0.22
MCF2L-230ENST00000491028 CTLA4P16410 223 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 SPI1P17947 270 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 LGALS3BPQ08380 585 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 SLC35D3Q5M8T2 416 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 PHYHD1Q5SRE7 291 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 UBE2J2Q8N2K1 259 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 OR9Q1Q8NGQ5 310 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 FBLIM1Q8WUP2 373 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 ASB5Q8WWX0 329 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 PTP4A1Q93096 173 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 UBE2FQ969M7 185 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 OTULINQ96BN8 352 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 CCDC120Q96HB5 630 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 Q96MT0 163 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 RASSF1Q9NS23 344 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 CLN6Q9NWW5 311 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 COQ3Q9NZJ6 369 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 H2AFY2Q9P0M6 372 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-230ENST00000491028 PRSS50Q9UI38 385 aa16.44■□□□□ 0.22
MCF2L-230ENST00000491028 B9D1Q9UPM9 204 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms