RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 ADAMDEC1O15204 470 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 CDC40O60508 579 aaKnown RBP eCLIP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 SCN2BO60939 215 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 REM1O75628 298 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 KCNK2O95069 426 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 LRATO95237 230 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 AGR2O95994 175 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 APOA1P02647 267 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 ABCB1P08183 1280 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 IFI6P09912 130 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 ANXA8P13928 327 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 GABRB1P18505 474 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 DRD5P21918 477 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 EPHA2P29317 976 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 PCGF2P35227 344 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 CHI3L1P36222 383 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 TGFBR1P36897 503 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 SOX3P41225 446 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 PPICP45877 212 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 UGT2B15P54855 530 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 PPIAP62937 165 aaKnown RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 RAE1P78406 368 aaKnown RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 KCNJ10P78508 379 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 IFITM2Q01629 132 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 HSPB3Q12988 150 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 SNTA1Q13424 505 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 IRF3Q14653 427 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 SLC10A1Q14973 349 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 EBPQ15125 230 aaKnown RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 IGFBP7Q16270 282 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 TIGD6Q17RP2 521 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 PRICKLE4Q2TBC4 344 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 TIMM50Q3ZCQ8 353 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 FAM71E1Q6IPT2 247 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 ARHGAP11AQ6P4F7 1023 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 ZCCHC12Q6PEW1 402 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 NUP54Q7Z3B4 507 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 CAMKMTQ7Z624 323 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 VTCN1Q7Z7D3 282 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 ANKRD46Q86W74 232 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 SLC44A2Q8IWA5 706 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 C9orf40Q8IXQ3 194 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 SLC34A3Q8N130 599 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 PARP16Q8N5Y8 322 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF527Q8NB42 609 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 MDS2Q8NDY4 140 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 OR2M7Q8NG81 312 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 OR52R1Q8NGF1 315 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 OR10Q1Q8NGQ4 319 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 OR9A2Q8NGT5 310 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 C16orf52Q8NHV5 167 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 SETD6Q8TBK2 473 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 HTRA1Q92743 480 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 KAT2AQ92830 837 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 MIB2Q96AX9 1013 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 CNRIP1Q96F85 164 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 SCMH1Q96GD3 660 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF486Q96H40 463 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 JSRP1Q96MG2 331 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 AMDHD1Q96NU7 426 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 MS4A4EQ96PG1 132 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 SIGLEC12Q96PQ1 595 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 PANX1Q96RD7 426 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 RHNO1Q9BSD3 238 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 OR2B2Q9GZK3 357 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 C6orf62Q9GZU0 229 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 RACGAP1Q9H0H5 632 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 PTGES2Q9H7Z7 377 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 SIAEQ9HAT2 523 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 POLE4Q9NR33 117 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 RASSF1Q9NS23 344 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 MAT2BQ9NZL9 334 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 CNOT2Q9NZN8 540 aaKnown RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 CRNNQ9UBG3 495 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 AASSQ9UDR5 926 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 PLEKHB1Q9UF11 243 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 ENOPH1Q9UHY7 261 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 POU2F3Q9UKI9 436 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 CES1P1Q9UKY3 287 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 NPIPA1Q9UND3 350 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 GRIP1Q9Y3R0 1128 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 LYVE1Q9Y5Y7 322 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 APCP25054 2843 aa4.23□□□□□ -1.73
CSTF1-205ENST00000490539 TNRC6AQ8NDV7 1962 aaKnown RBP4.23□□□□□ -1.73
CSTF1-205ENST00000490539 TRGV8A0A0C4DH27 118 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 FAM172BPA6NC97 362 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ARRDC5A6NEK1 342 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 EFCAB10A6NFE3 127 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 DNAJC9-AS1A6NH13 148 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 OR6C70A6NIJ9 312 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 WASHC1A8K0Z3 465 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 KRTAP29-1A8MX34 341 aaPredicted RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CENPBD1B2RD01 187 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TNFRSF11BO00300 401 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 EMC8O43402 210 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 MPZL2O60487 215 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 SLC19A2O60779 497 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TBX19O60806 448 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TRAPPC6AO75865 159 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 NEURL1O76050 574 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms