RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 TRIP10Q15642 601 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 INTS11Q5TA45 600 aaKnown RBP10.15□□□□□ -0.78
SRSF4-204ENST00000489898 DEF8Q6ZN54 512 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 MEX3DQ86XN8 651 aaKnown RBP10.15□□□□□ -0.78
SRSF4-204ENST00000489898 MICU2Q8IYU8 434 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 SLC22A24Q8N4F4 322 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 FAM86B1Q8N7N1 296 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 MCHR2Q969V1 340 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 MSI2Q96DH6 328 aaKnown RBP10.15□□□□□ -0.78
SRSF4-204ENST00000489898 C1orf159Q96HA4 380 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 PRRC1Q96M27 445 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 TSPAN32Q96QS1 320 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 KCNK17Q96T54 332 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 SH3GL3Q99963 347 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 FUZQ9BT04 418 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 POLR2J2Q9GZM3 115 aaKnown RBP10.15□□□□□ -0.78
SRSF4-204ENST00000489898 RACGAP1Q9H0H5 632 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 POLR2J3Q9H1A7 115 aaKnown RBP10.15□□□□□ -0.78
SRSF4-204ENST00000489898 MOV10Q9HCE1 1003 aaKnown RBP10.15□□□□□ -0.78
SRSF4-204ENST00000489898 RIMS3Q9UJD0 308 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 CAPN7Q9Y6W3 813 aa10.15□□□□□ -0.78
SRSF4-204ENST00000489898 IGLV3-9A0A075B6K5 115 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 A8MV72 311 aaPredicted RBP10.14□□□□□ -0.79
SRSF4-204ENST00000489898 NDUFS8O00217 210 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 CDC42EP2O14613 210 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 DHHO43323 396 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 SLC2A10O95528 541 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 STAMBPO95630 424 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 NPR2P20594 1047 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 AHCYP23526 432 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 PTDSS1P48651 473 aaKnown RBP10.14□□□□□ -0.79
SRSF4-204ENST00000489898 PPP2R2BQ00005 443 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 CHRNB3Q05901 458 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 PIGFQ07326 219 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 HNRNPA0Q13151 305 aaKnown RBP10.14□□□□□ -0.79
SRSF4-204ENST00000489898 RAB39AQ14964 217 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 MAD2L1BPQ15013 274 aaPredicted RBP10.14□□□□□ -0.79
SRSF4-204ENST00000489898 LRRC23Q53EV4 343 aaPredicted RBP10.14□□□□□ -0.79
SRSF4-204ENST00000489898 ERICH5Q6P6B1 374 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 TTC33Q6PID6 262 aaPredicted RBP10.14□□□□□ -0.79
SRSF4-204ENST00000489898 NANOGNBQ7Z5D8 188 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 PHC2Q8IXK0 858 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 CCDC36Q8IYA8 594 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 DEPDC4Q8N2C3 294 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 FAM156AQ8NDB6 213 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 OR2T12Q8NG77 320 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 TMEM239Q8WW34 195 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 GTF3AQ92664 365 aaKnown RBP10.14□□□□□ -0.79
SRSF4-204ENST00000489898 YIPF5Q969M3 257 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 FOXN4Q96NZ1 517 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 DYSFO75923 2080 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 PKD1L1Q8TDX9 2849 aa10.14□□□□□ -0.79
SRSF4-204ENST00000489898 TRRAPQ9Y4A5 3859 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 LOC100653049A0A140TA62 436 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 LOC390937A0A1W2PQ73 354 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 CENPBD1B2RD01 187 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 LYNX1G3V0Z9 82 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 WNT9BO14905 357 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 ICMTO60725 284 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 KRT34O76011 436 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 SNAP29O95721 258 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 HPXP02790 462 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 SEMG1P04279 462 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 SERPINA5P05154 406 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 SCG5P05408 212 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 LYNX1P0DP58 116 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 TROVE2P10155 538 aaKnown RBP eCLIP10.13□□□□□ -0.79
SRSF4-204ENST00000489898 THRBP10828 461 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 CCL2P13500 99 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 ZNF23P17027 643 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 USF1P22415 310 aaPredicted RBP10.13□□□□□ -0.79
SRSF4-204ENST00000489898 GLRXP35754 106 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 WNT5AP41221 380 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 LIMS1P48059 325 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 GSK3BP49841 420 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 PDLIM4P50479 330 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 SLC7A2P52569 658 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 SEC24CP53992 1094 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 RAB1AP62820 205 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 CBX1P83916 185 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 MYBPC1Q00872 1141 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 IL1RL1Q01638 556 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 CYLC2Q14093 348 aaPredicted RBP10.13□□□□□ -0.79
SRSF4-204ENST00000489898 DAG1Q14118 895 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 NRN1LQ496H8 165 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 SLC25A47Q6Q0C1 308 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 CBLL1Q75N03 491 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 FAM122BQ7Z309 247 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 PIWIL3Q7Z3Z3 882 aaKnown RBP10.13□□□□□ -0.79
SRSF4-204ENST00000489898 SPATA21Q7Z572 469 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 ZNF101Q8IZC7 436 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 CPEB3Q8NE35 698 aaKnown RBP10.13□□□□□ -0.79
SRSF4-204ENST00000489898 OR4K5Q8NGD3 323 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 OR6N1Q8NGY5 312 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 RNF217Q8TC41 542 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 RASSF5Q8WWW0 418 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 ZNF566Q969W8 418 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 TPK1Q9H3S4 243 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 YAE1D1Q9NRH1 226 aa10.13□□□□□ -0.79
SRSF4-204ENST00000489898 SLC13A4Q9UKG4 626 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms