RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 SEC61A2Q9H9S3 476 aa16.63■□□□□ 0.25
EPHB4-207ENST00000489808 DLL4Q9NR61 685 aa16.63■□□□□ 0.25
EPHB4-207ENST00000489808 STX18Q9P2W9 335 aaKnown RBP16.63■□□□□ 0.25
EPHB4-207ENST00000489808 ZNF346Q9UL40 294 aaKnown RBP16.63■□□□□ 0.25
EPHB4-207ENST00000489808 USF3Q68DE3 2245 aa16.63■□□□□ 0.25
EPHB4-207ENST00000489808 TRAV27A0A087WT01 109 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 CDC42EP2O14613 210 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 CELA3BP08861 270 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 CD79AP11912 226 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 APOBEC3AP31941 199 aaPredicted RBP16.62■□□□□ 0.25
EPHB4-207ENST00000489808 CDKN1AP38936 164 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 GPR4P46093 362 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 IDH3GP51553 393 aaPredicted RBP16.62■□□□□ 0.25
EPHB4-207ENST00000489808 CTXN1P60606 82 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 PIGFQ07326 219 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 SKA3Q8IX90 412 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 IL17RDQ8NFM7 739 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 OR13C2Q8NGS9 318 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 BCAS4Q8TDM0 211 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 MCUR1Q96AQ8 359 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 CBLN4Q9NTU7 201 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 ZNF224Q9NZL3 707 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 ACTR3BQ9P1U1 418 aa16.62■□□□□ 0.25
EPHB4-207ENST00000489808 TRBV4-1A0A0J9YWV2 114 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 PTP4A3O75365 173 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 FOSL1P15407 271 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 CALCRP30988 508 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 ZNF133P52736 654 aaPredicted RBP16.61■□□□□ 0.25
EPHB4-207ENST00000489808 SMIM11AP58511 58 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 RPL27P61353 136 aaKnown RBP16.61■□□□□ 0.25
EPHB4-207ENST00000489808 MYBPC1Q00872 1141 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 NPRL3Q12980 569 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 GSG1Q2KHT4 349 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 ZBED5Q49AG3 693 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 FGD3Q5JSP0 725 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 C11orf71Q6IPW1 123 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 MYPOPQ86VE0 399 aaPredicted RBP16.61■□□□□ 0.25
EPHB4-207ENST00000489808 IGFN1Q86VF2 1251 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 SLC22A24Q8N4F4 322 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 NOXO1Q8NFA2 376 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 OR52J3Q8NH60 311 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 HDAC2Q92769 488 aaKnown RBP16.61■□□□□ 0.25
EPHB4-207ENST00000489808 NMD3Q96D46 503 aaKnown RBP16.61■□□□□ 0.25
EPHB4-207ENST00000489808 Q96MF0 132 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 ZNF75AQ96N20 296 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 FUZQ9BT04 418 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 DENND2DQ9H6A0 471 aaPredicted RBP16.61■□□□□ 0.25
EPHB4-207ENST00000489808 IL1RAPQ9NPH3 570 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 TMEM38BQ9NVV0 291 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 TAS2R1Q9NYW7 299 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 TMEM5Q9Y2B1 443 aa16.61■□□□□ 0.25
EPHB4-207ENST00000489808 ENTPD5O75356 428 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 IGHMP01871 453 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 OR8G3PP0DMU2 310 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 OMPP47874 163 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 RAB1AP62820 205 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 TOP3AQ13472 1001 aaPredicted RBP16.6■□□□□ 0.25
EPHB4-207ENST00000489808 SEC23BQ15437 767 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 OR4F15Q8NGB8 312 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 FGFBP3Q8TAT2 258 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 NANOS1Q8WY41 292 aaKnown RBP16.6■□□□□ 0.25
EPHB4-207ENST00000489808 FAM46AQ96IP4 442 aaKnown RBP16.6■□□□□ 0.25
EPHB4-207ENST00000489808 KCNK17Q96T54 332 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 C1orf21Q9H246 121 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 NOX3Q9HBY0 568 aa16.6■□□□□ 0.25
EPHB4-207ENST00000489808 IGHV2OR16-5A0A0B4J2B6 119 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 UBL3O95164 117 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 FABP3P05413 133 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 PATE4P0C8F1 98 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 ZNF26P17031 533 aaPredicted RBP16.59■□□□□ 0.25
EPHB4-207ENST00000489808 ACVR1BP36896 505 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 LIMS1P48059 325 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 GIPRP48546 466 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 ZNF84P51523 738 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 HGFACQ04756 655 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 TRIM25Q14258 630 aaKnown RBP16.59■□□□□ 0.25
EPHB4-207ENST00000489808 MST1LQ2TV78 715 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 NRN1LQ496H8 165 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 C10orf128Q5T292 105 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 CYP2R1Q6VVX0 501 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 TRPM8Q7Z2W7 1104 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 OR4K5Q8NGD3 323 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 RBP7Q96R05 134 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 SH3GL3Q99963 347 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 ALG12Q9BV10 488 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 CA10Q9NS85 328 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 MED13LQ71F56 2210 aa16.59■□□□□ 0.25
EPHB4-207ENST00000489808 IGKV1D-43A0A0B4J1Z2 117 aa16.58■□□□□ 0.24
EPHB4-207ENST00000489808 SH3PXD2BA1X283 911 aa16.58■□□□□ 0.24
EPHB4-207ENST00000489808 A6NIZ1 184 aa16.58■□□□□ 0.24
EPHB4-207ENST00000489808 MGRN1O60291 552 aa16.58■□□□□ 0.24
EPHB4-207ENST00000489808 GADD45GO95257 159 aa16.58■□□□□ 0.24
EPHB4-207ENST00000489808 FARS2O95363 451 aaKnown RBP16.58■□□□□ 0.24
EPHB4-207ENST00000489808 CD14P08571 375 aa16.58■□□□□ 0.24
EPHB4-207ENST00000489808 ZNF14P17017 642 aaPredicted RBP16.58■□□□□ 0.24
EPHB4-207ENST00000489808 PTDSS1P48651 473 aaKnown RBP16.58■□□□□ 0.24
EPHB4-207ENST00000489808 RAP1BP61224 184 aa16.58■□□□□ 0.24
EPHB4-207ENST00000489808 RAP1AP62834 184 aa16.58■□□□□ 0.24
EPHB4-207ENST00000489808 ERVK-25P63136 954 aa16.58■□□□□ 0.24
EPHB4-207ENST00000489808 MS4A2Q01362 244 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms