RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CLRN1P58418 232 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 SNRPD2P62316 118 aaKnown RBP21.62■■□□□ 1.05
HMGN1-217ENST00000489072 RAB1AP62820 205 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 MYBPC1Q00872 1141 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 EFNB3Q15768 340 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 CLEC2AQ6UVW9 174 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 TSEN54Q7Z6J9 526 aaKnown RBP21.62■■□□□ 1.05
HMGN1-217ENST00000489072 MEX3DQ86XN8 651 aaKnown RBP21.62■■□□□ 1.05
HMGN1-217ENST00000489072 SLC22A24Q8N4F4 322 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 RBM15BQ8NDT2 890 aaKnown RBP21.62■■□□□ 1.05
HMGN1-217ENST00000489072 NOXO1Q8NFA2 376 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 IL17RDQ8NFM7 739 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 NANOS1Q8WY41 292 aaKnown RBP21.62■■□□□ 1.05
HMGN1-217ENST00000489072 BPIFA2Q96DR5 249 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 SORCS2Q96PQ0 1159 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 FNDC11Q9BVV2 318 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 ZNF442Q9H7R0 627 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 TRMUO75648 421 aaKnown RBP21.61■■□□□ 1.05
HMGN1-217ENST00000489072 UBL3O95164 117 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 MAKP20794 623 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 PCSK6P29122 969 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 IFNA8P32881 189 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 TRAM2Q15035 370 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 ARMC4Q5T2S8 1044 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 FKBP9P1Q75LS8 142 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 NRMQ8IXM6 262 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 SYT14Q8NB59 555 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 MCHR2Q969V1 340 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 FAM162AQ96A26 154 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 SH3GL3Q99963 347 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 PLK3Q9H4B4 646 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 EGFL7Q9UHF1 273 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 HIF3AQ9Y2N7 669 aa21.61■■□□□ 1.05
HMGN1-217ENST00000489072 ANK3Q12955 4377 aaKnown RBP21.61■■□□□ 1.05
HMGN1-217ENST00000489072 INAFM1C9JVW0 142 aa21.6■■□□□ 1.05
HMGN1-217ENST00000489072 F12P00748 615 aaPredicted RBP21.6■■□□□ 1.05
HMGN1-217ENST00000489072 ZNF35P13682 527 aa21.6■■□□□ 1.05
HMGN1-217ENST00000489072 ACADSP16219 412 aa21.6■■□□□ 1.05
HMGN1-217ENST00000489072 DAP3P51398 398 aaKnown RBP21.6■■□□□ 1.05
HMGN1-217ENST00000489072 DSCR9P59020 149 aa21.6■■□□□ 1.05
HMGN1-217ENST00000489072 GNGT1P63211 74 aa21.6■■□□□ 1.05
HMGN1-217ENST00000489072 SNTB2Q13425 540 aaKnown RBP21.6■■□□□ 1.05
HMGN1-217ENST00000489072 DAG1Q14118 895 aa21.6■■□□□ 1.05
HMGN1-217ENST00000489072 KRT80Q6KB66 452 aa21.6■■□□□ 1.05
HMGN1-217ENST00000489072 DENND2DQ9H6A0 471 aaPredicted RBP21.6■■□□□ 1.05
HMGN1-217ENST00000489072 SPAG4Q9NPE6 437 aa21.6■■□□□ 1.05
HMGN1-217ENST00000489072 TMEM129A0AVI4 362 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 NPIPB13A6NJU9 1138 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 CENPBD1B2RD01 187 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 NPIPB4C9JG80 1138 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 RAB36O95755 333 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 OR8G3PP0DMU2 310 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 NPR2P20594 1047 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 NR4A1P22736 598 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 FHL1Q13642 323 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 RAB39AQ14964 217 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 MSMPQ1L6U9 139 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 ZNF584Q8IVC4 421 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 ANKS4BQ8N8V4 417 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 OR4K5Q8NGD3 323 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 TXNIPQ9H3M7 391 aa21.59■■□□□ 1.05
HMGN1-217ENST00000489072 A0A087WUU8 490 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 HTR3EA5X5Y0 456 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 hCG_2039718K7EN88 272 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 ZNF133P52736 654 aaPredicted RBP21.58■■□□□ 1.05
HMGN1-217ENST00000489072 PRKCDQ05655 676 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 ALG10Q5BKT4 473 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 TBPL2Q6SJ96 375 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 HDDC2Q7Z4H3 204 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 SVOPLQ8N434 492 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 RNF148Q8N7C7 305 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 LRRC75AQ8NAA5 344 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 C10orf105Q8TEF2 133 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 ACOT11Q8WXI4 607 aaPredicted RBP21.58■■□□□ 1.05
HMGN1-217ENST00000489072 FAM168AQ92567 244 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 HDAC2Q92769 488 aaKnown RBP21.58■■□□□ 1.05
HMGN1-217ENST00000489072 NMD3Q96D46 503 aaKnown RBP21.58■■□□□ 1.05
HMGN1-217ENST00000489072 VRK1Q99986 396 aaPredicted RBP21.58■■□□□ 1.05
HMGN1-217ENST00000489072 ADA2Q9NZK5 511 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 ENPP4Q9Y6X5 453 aa21.58■■□□□ 1.05
HMGN1-217ENST00000489072 TRAV27A0A087WT01 109 aa21.57■■□□□ 1.04
HMGN1-217ENST00000489072 SLC2A10O95528 541 aa21.57■■□□□ 1.04
HMGN1-217ENST00000489072 SAGP10523 405 aaPredicted RBP21.57■■□□□ 1.04
HMGN1-217ENST00000489072 TOP3AQ13472 1001 aaPredicted RBP21.57■■□□□ 1.04
HMGN1-217ENST00000489072 C10orf128Q5T292 105 aa21.57■■□□□ 1.04
HMGN1-217ENST00000489072 GLYATQ6IB77 296 aa21.57■■□□□ 1.04
HMGN1-217ENST00000489072 PIGWQ7Z7B1 504 aa21.57■■□□□ 1.04
HMGN1-217ENST00000489072 IGFN1Q86VF2 1251 aa21.57■■□□□ 1.04
HMGN1-217ENST00000489072 DOK1Q99704 481 aa21.57■■□□□ 1.04
HMGN1-217ENST00000489072 RPS6KA6Q9UK32 745 aa21.57■■□□□ 1.04
HMGN1-217ENST00000489072 IGKV1D-43A0A0B4J1Z2 117 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 GPRIN2O60269 458 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 SERPINA5P05154 406 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 PPOXP50336 477 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 ZNF84P51523 738 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 FMODQ06828 376 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 ZNF730Q6ZMV8 503 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 MBOAT2Q6ZWT7 520 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 CDK20Q8IZL9 346 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 RNF113BQ8IZP6 322 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms