RNA–Protein interactions for RNA: ENST00000488998.1

CCDC146-209, Transcript of coiled-coil domain containing 146, humanhuman

TSL 3

Gene CCDC146, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-209ENST00000488998 RNF125Q96EQ8 232 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 OTUB1Q96FW1 271 aaPredicted RBP3□□□□□ -1.93
CCDC146-209ENST00000488998 SLC41A3Q96GZ6 507 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 TMEM80Q96HE8 168 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 ZNF582Q96NG8 517 aaPredicted RBP3□□□□□ -1.93
CCDC146-209ENST00000488998 MS4A4EQ96PG1 132 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 IL4I1Q96RQ9 567 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 STACQ99469 402 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 MGLLQ99685 303 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 CMKLR1Q99788 373 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 MROQ9BYG7 248 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 POLR2J2Q9GZM3 115 aaKnown RBP3□□□□□ -1.93
CCDC146-209ENST00000488998 SLIRPQ9GZT3 109 aaKnown RBP3□□□□□ -1.93
CCDC146-209ENST00000488998 ZNF350Q9GZX5 532 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 DCSTAMPQ9H295 470 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 TCEAL2Q9H3H9 227 aaPredicted RBP3□□□□□ -1.93
CCDC146-209ENST00000488998 PIGUQ9H490 435 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 ANKRA2Q9H9E1 313 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 UCK1Q9HA47 277 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 HHATLQ9HCP6 504 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 HMG20AQ9NP66 347 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 ISYNA1Q9NPH2 558 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 EQTNQ9NQ60 294 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 POLE3Q9NRF9 147 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 PCDHB16Q9NRJ7 776 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 MED17Q9NVC6 651 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 FAIMQ9NVQ4 179 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 HRASLS2Q9NWW9 162 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 KLHL28Q9NXS3 571 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 MAT2BQ9NZL9 334 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 CCDC59Q9P031 241 aaKnown RBP3□□□□□ -1.93
CCDC146-209ENST00000488998 ZNF223Q9UK11 482 aaPredicted RBP3□□□□□ -1.93
CCDC146-209ENST00000488998 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3□□□□□ -1.93
CCDC146-209ENST00000488998 DIMT1Q9UNQ2 313 aaKnown RBP3□□□□□ -1.93
CCDC146-209ENST00000488998 SATB2Q9UPW6 733 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 ERGIC3Q9Y282 383 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 ZNF443Q9Y2A4 671 aaPredicted RBP3□□□□□ -1.93
CCDC146-209ENST00000488998 RPL36Q9Y3U8 105 aaKnown RBP3□□□□□ -1.93
CCDC146-209ENST00000488998 WDR45Q9Y484 360 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 SPACA6W5XKT8 324 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 FER1L5A0AVI2 2057 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 PCNX3Q9H6A9 2034 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 ALPK2Q86TB3 2170 aa3□□□□□ -1.93
CCDC146-209ENST00000488998 A0A075B6Q4 140 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 IGHV1OR15-9A0A0B4J2B8 117 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 IRGMA1A4Y4 181 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 HYKKA2RU49 373 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 TRAPPC13A5PLN9 417 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 ZNF860A6NHJ4 632 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 LILRA5A6NI73 299 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 TTC36A6NLP5 189 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 CPSF4LA6NMK7 179 aaKnown RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 NPIPB9F8W1W9 429 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 H3BN98 237 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 H3BQ06 376 aaPredicted RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 J3QRK9 145 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 TAF4O00268 1085 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 CCRL2O00421 344 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 AP3D1O14617 1153 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 LDLRAD4O15165 306 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 CHST10O43529 356 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 HCRTR1O43613 425 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 TLX2O43763 284 aaPredicted RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 FGF17O60258 216 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 KIAA0513O60268 411 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 SRPX2O60687 465 aaPredicted RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 CTNSO60931 367 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 ZNF217O75362 1048 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 STX11O75558 287 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 GPX5O75715 221 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 SOX14O95416 240 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 CRYAAP02489 173 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 CSF2P04141 144 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 HMGN1P05114 100 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 RPLP0P05388 317 aaKnown RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 DBIP07108 87 aaKnown RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 THEGLP0DJG4 465 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 RNH1P13489 461 aaKnown RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 NT5EP21589 574 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 DRD5P21918 477 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 TCEA1P23193 301 aaKnown RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 CD27P26842 260 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 CD40LGP29965 261 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 BDKRB2P30411 391 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 ETV6P41212 452 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 FASLGP48023 281 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 CLK1P49759 484 aaKnown RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 SMSP52788 366 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 PPP5CP53041 499 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 CTBP2P56545 445 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 VSX2P58304 361 aaPredicted RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 TAS2R41P59536 307 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 SEC61BP60468 96 aaKnown RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 LSM3P62310 102 aaKnown RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 IFITM3Q01628 133 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 RELQ04864 619 aaPredicted RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 PRKCDQ05655 676 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 RAB40BQ12829 278 aa2.99□□□□□ -1.93
CCDC146-209ENST00000488998 MLLT11Q13015 90 aaPredicted RBP2.99□□□□□ -1.93
CCDC146-209ENST00000488998 C1orf61Q13536 156 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms