RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 SHPKQ9UHJ6 478 aa4.01□□□□□ -1.77
CUL3-211ENST00000487558 NUFIP1Q9UHK0 495 aaKnown RBP4.01□□□□□ -1.77
CUL3-211ENST00000487558 AKNAQ7Z591 1439 aa4.01□□□□□ -1.77
CUL3-211ENST00000487558 PDS5BQ9NTI5 1447 aa4.01□□□□□ -1.77
CUL3-211ENST00000487558 CHD4Q14839 1912 aa4.01□□□□□ -1.77
CUL3-211ENST00000487558 KLLNB2CW77 178 aa4□□□□□ -1.77
CUL3-211ENST00000487558 CASC3O15234 703 aaKnown RBP4□□□□□ -1.77
CUL3-211ENST00000487558 ERCC1P07992 297 aaPredicted RBP4□□□□□ -1.77
CUL3-211ENST00000487558 ZNF19P17023 458 aa4□□□□□ -1.77
CUL3-211ENST00000487558 UQCRFS1P47985 274 aa4□□□□□ -1.77
CUL3-211ENST00000487558 RORCP51449 518 aa4□□□□□ -1.77
CUL3-211ENST00000487558 CCR8P51685 355 aa4□□□□□ -1.77
CUL3-211ENST00000487558 WNT4P56705 351 aa4□□□□□ -1.77
CUL3-211ENST00000487558 IRX3P78415 501 aaPredicted RBP4□□□□□ -1.77
CUL3-211ENST00000487558 LIPEQ05469 1076 aa4□□□□□ -1.77
CUL3-211ENST00000487558 ZNF630Q2M218 657 aaPredicted RBP4□□□□□ -1.77
CUL3-211ENST00000487558 COA6Q5JTJ3 125 aaKnown RBP4□□□□□ -1.77
CUL3-211ENST00000487558 PPM1LQ5SGD2 360 aa4□□□□□ -1.77
CUL3-211ENST00000487558 LY6G6FQ5SQ64 297 aa4□□□□□ -1.77
CUL3-211ENST00000487558 VAX1Q5SQQ9 334 aa4□□□□□ -1.77
CUL3-211ENST00000487558 FRMPD2BQ6IN97 320 aa4□□□□□ -1.77
CUL3-211ENST00000487558 TMEM53Q6P2H8 277 aa4□□□□□ -1.77
CUL3-211ENST00000487558 IQCKQ8N0W5 287 aa4□□□□□ -1.77
CUL3-211ENST00000487558 TMEM54Q969K7 222 aa4□□□□□ -1.77
CUL3-211ENST00000487558 PIK3IP1Q96FE7 263 aa4□□□□□ -1.77
CUL3-211ENST00000487558 PKNOX2Q96KN3 472 aa4□□□□□ -1.77
CUL3-211ENST00000487558 PSME2Q9UL46 239 aa4□□□□□ -1.77
CUL3-211ENST00000487558 ZNF256Q9Y2P7 627 aaPredicted RBP4□□□□□ -1.77
CUL3-211ENST00000487558 GOLT1BQ9Y3E0 138 aa4□□□□□ -1.77
CUL3-211ENST00000487558 CNTNAP1P78357 1384 aa4□□□□□ -1.77
CUL3-211ENST00000487558 TTC41PQ6P2S7 1318 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 IGKV1D-13A0A0B4J2D9 117 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 A0A1B0GVI7 797 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 NCF1BA6NI72 391 aaPredicted RBP3.99□□□□□ -1.77
CUL3-211ENST00000487558 ZNF726A6NNF4 738 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 NCF1CA8MVU1 366 aaPredicted RBP3.99□□□□□ -1.77
CUL3-211ENST00000487558 XKRYO14609 159 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 HUS1O60921 280 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 OR8G3PP0DMU2 310 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 IGKV1-13P0DP09 117 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 CALM1P0DP23 149 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 CALM2P0DP24 149 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 CALM3P0DP25 149 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 CRISP2P16562 243 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 HMOX2P30519 316 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 SERPINB5P36952 375 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 CTRLP40313 264 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 ACTA2P62736 377 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 ACTG2P63267 376 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 ACTC1P68032 377 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 ACTA1P68133 377 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 CLINT1Q14677 625 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 RFX4Q33E94 735 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 ZBED5Q49AG3 693 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 TWF2Q6IBS0 349 aaKnown RBP3.99□□□□□ -1.77
CUL3-211ENST00000487558 TMEM220Q6QAJ8 160 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 OTUD6AQ7L8S5 288 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 OFCC1Q8IZS5 231 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 FAM71E2Q8N5Q1 922 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 HSD17B11Q8NBQ5 300 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 BPIFCQ8NFQ6 507 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 OR6X1Q8NH79 312 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 ZNF502Q8TBZ5 544 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 ACER1Q8TDN7 264 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 GEMIN6Q8WXD5 167 aaKnown RBP3.99□□□□□ -1.77
CUL3-211ENST00000487558 NRTNQ99748 197 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 PTTG3PQ9NZH4 202 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 ING4Q9UNL4 249 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
CUL3-211ENST00000487558 RLFQ13129 1914 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 TRAV39A0A0B4J263 110 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 PEX7O00628 323 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 EIF3HO15372 352 aaKnown RBP eCLIP3.98□□□□□ -1.77
CUL3-211ENST00000487558 FGFR1OPO95684 399 aaKnown RBP3.98□□□□□ -1.77
CUL3-211ENST00000487558 INSP01308 110 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 IGHV4-34P06331 123 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 CCNB1P14635 433 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 AK4P27144 223 aaPredicted RBP3.98□□□□□ -1.77
CUL3-211ENST00000487558 NUDT1P36639 197 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 CSNK1DP48730 415 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 TWF1Q12792 350 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 DAZ2Q13117 558 aaKnown RBP3.98□□□□□ -1.77
CUL3-211ENST00000487558 TTC23LQ6PF05 361 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 ACP7Q6ZNF0 438 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 TMEM179Q6ZVK1 233 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 TMCO2Q7Z6W1 182 aaPredicted RBP3.98□□□□□ -1.77
CUL3-211ENST00000487558 C11orf53Q8IXP5 236 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 MICU2Q8IYU8 434 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 LINC01555Q8NAE3 123 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 NRGNQ92686 78 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 MYDGFQ969H8 173 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 C8orf44Q96CB5 159 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 DAZ3Q9NR90 486 aaKnown RBP3.98□□□□□ -1.77
CUL3-211ENST00000487558 HRASLS2Q9NWW9 162 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 SLC25A37Q9NYZ2 338 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 HEBP2Q9Y5Z4 205 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 PLEKHG2Q9H7P9 1386 aa3.98□□□□□ -1.77
CUL3-211ENST00000487558 PHF3Q92576 2039 aaKnown RBP3.97□□□□□ -1.77
CUL3-211ENST00000487558 TRBV9A0A0B4J1U6 114 aa3.97□□□□□ -1.77
CUL3-211ENST00000487558 CHST1O43916 411 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms