RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TICRRQ7Z2Z1 1910 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 OBSL1O75147 1896 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 TRBV5-5A0A0J9YX44 114 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF729A6NN14 1252 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 RNASEK-C17orf49H0YIS7 233 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 IGHV2-5P01817 119 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 OR8U8P0C7N1 319 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF735P0CB33 412 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 RCC1P18754 421 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 GABRR2P28476 465 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 GPX4P36969 197 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 POU3F4P49335 361 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 METAP1P53582 386 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 ALKBH1Q13686 389 aaKnown RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 C2orf76Q3KRA6 126 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 SCGB2B2Q4G0G5 96 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 C9orf152Q5JTZ5 239 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 ARHGAP40Q5TG30 622 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 RHOUQ7L0Q8 258 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 WDSUB1Q8N9V3 476 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 NPEPL1Q8NDH3 523 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 OR10AC1Q8NH08 325 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 CCDC74AQ96AQ1 378 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 SEH1LQ96EE3 360 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 NKX3-1Q99801 234 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 PCBD2Q9H0N5 130 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 CDV3Q9UKY7 258 aaKnown RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF346Q9UL40 294 aaKnown RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 FARSAQ9Y285 508 aaKnown RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 YBX2Q9Y2T7 364 aaKnown RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 PCDHGA1Q9Y5H4 931 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 LRRK1Q38SD2 2015 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 POM121BA6NF01 834 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 EEF1E1-BLOC1S5C9J1V9 151 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 LEFTY2O00292 366 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 SRPX2O60687 465 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 UPK3AO75631 287 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 DBIP07108 87 aaKnown RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 CD14P08571 375 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 FBXO45P0C2W1 286 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 NID1P14543 1247 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 NQO2P16083 231 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 PAX6P26367 422 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 SCAND1P57086 179 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 PLAURQ03405 335 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 HGFACQ04756 655 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 TGIF1Q15583 401 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ODF4Q2M2E3 257 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 OR52W1Q6IF63 320 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 PARS2Q7L3T8 475 aaKnown RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF619Q8N2I2 560 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 TMEM229BQ8NBD8 167 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 OR51A4Q8NGJ6 313 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 OR13C8Q8NGS7 320 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 TMEM41AQ96HV5 264 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ZC3H10Q96K80 434 aaKnown RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 PTCHD1Q96NR3 888 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 SGIP1Q9BQI5 828 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 EDEM2Q9BV94 578 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ATG5Q9H1Y0 275 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 TM7SF3Q9NS93 570 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 DZANK1Q9NVP4 752 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 FLRT3Q9NZU0 649 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 GPR34Q9UPC5 381 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 VSIG4Q9Y279 399 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 C9JQL5 133 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ST8SIA5O15466 376 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 AGR2O95994 175 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 CSN2P05814 226 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 KLK3P07288 261 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 DCNP07585 359 aaKnown RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ITGA5P08648 1049 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ST6GAL1P15907 406 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF14P17017 642 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 HLA-GP17693 338 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 RPS4Y1P22090 263 aaKnown RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 CPT2P23786 658 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ZBTB25P24278 435 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 EIF2S3P41091 472 aaKnown RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 CAV2P51636 162 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 STARD6P59095 220 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ACTBP60709 375 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ACTG1P63261 375 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 SSBP1Q04837 148 aaKnown RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ALG11Q2TAA5 492 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 Q3ZCU0 254 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 OR10K2Q6IF99 312 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 FIGNL1Q6PIW4 674 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 SLC39A5Q6ZMH5 540 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 BPIFB2Q8N4F0 458 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF511Q8NB15 262 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 OR4K17Q8NGC6 315 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 TCTEX1D2Q8WW35 142 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 TMEM106AQ96A25 262 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF514Q96K75 400 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 NECAB3Q96P71 396 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 PFDN5Q99471 154 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 SLC6A7Q99884 636 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 ULBP3Q9BZM4 244 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms