RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 TOMM20Q15388 145 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 TMEM44Q2T9K0 475 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 PLA1AQ53H76 456 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 REEP3Q6NUK4 255 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 ARSKQ6UWY0 536 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 ZNF600Q6ZNG1 722 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 NUP54Q7Z3B4 507 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 GDF7Q7Z4P5 450 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 TCEANCQ8N8B7 351 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 DTX3Q8N9I9 347 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 GNRHR2Q96P88 292 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 OR2M2Q96R28 347 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 POLR2J3Q9H1A7 115 aaKnown RBP9.68□□□□□ -0.86
DDX56-212ENST00000485367 PPA2Q9H2U2 334 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 CLEC4MQ9H2X3 399 aaPredicted RBP9.68□□□□□ -0.86
DDX56-212ENST00000485367 GALNT9Q9HCQ5 603 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 ACKR4Q9NPB9 350 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 B3GAT2Q9NPZ5 323 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 COPZ2Q9P299 210 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 FAM215AQ9Y5M1 114 aa9.68□□□□□ -0.86
DDX56-212ENST00000485367 TRBV4-1A0A0J9YWV2 114 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 NKX2-6A6NCS4 301 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 C2orf72A6NCS6 295 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 H3BN98 237 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 GNB5O14775 395 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 PRODHO43272 600 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 HPGDSO60760 199 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 WDR1O75083 606 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 H1F0P07305 194 aaKnown RBP9.67□□□□□ -0.86
DDX56-212ENST00000485367 DDCP20711 480 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 C4BPBP20851 252 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 MPIP34949 423 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 CHI3L1P36222 383 aaPredicted RBP9.67□□□□□ -0.86
DDX56-212ENST00000485367 RAG2P55895 527 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 POLR2GP62487 172 aaKnown RBP eCLIP9.67□□□□□ -0.86
DDX56-212ENST00000485367 RPS25P62851 125 aaKnown RBP9.67□□□□□ -0.86
DDX56-212ENST00000485367 EFNB1P98172 346 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 SYT14P1Q58G82 188 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 C1orf185Q5T7R7 199 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 RTL6Q6ICC9 239 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 MEX3BQ6ZN04 569 aaKnown RBP9.67□□□□□ -0.86
DDX56-212ENST00000485367 OR8H3Q8N146 312 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 UBE2J2Q8N2K1 259 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 LILRB2Q8N423 598 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 NEIL3Q8TAT5 605 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.67□□□□□ -0.86
DDX56-212ENST00000485367 KCTD12Q96CX2 325 aaKnown RBP9.67□□□□□ -0.86
DDX56-212ENST00000485367 PPIL3Q9H2H8 161 aaKnown RBP9.67□□□□□ -0.86
DDX56-212ENST00000485367 A4GALTQ9NPC4 353 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 KCNJ16Q9NPI9 418 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 MIEF1Q9NQG6 463 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 ZNF275Q9NSD4 429 aaPredicted RBP9.67□□□□□ -0.86
DDX56-212ENST00000485367 ASB6Q9NWX5 421 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 DCAF16Q9NXF7 216 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 EMC3Q9P0I2 261 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 UBQLN2Q9UHD9 624 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 CBLCQ9ULV8 474 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 MGAT4AQ9UM21 535 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 GPR55Q9Y2T6 319 aaPredicted RBP9.67□□□□□ -0.86
DDX56-212ENST00000485367 DCHS2Q6V1P9 2916 aa9.67□□□□□ -0.86
DDX56-212ENST00000485367 HCFC1P51610 2035 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 FRG2CA6NGY1 282 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 FFAR1O14842 300 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 OR10H3O60404 316 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 REM1O75628 298 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 RRASP10301 218 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 GSTM3P21266 225 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 RAB14P61106 215 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 P2RY14Q15391 338 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 AANATQ16613 207 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 PRSS53Q2L4Q9 553 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 FNDC7Q5VTL7 733 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 ZNF57Q68EA5 555 aaPredicted RBP9.66□□□□□ -0.86
DDX56-212ENST00000485367 FAM71E1Q6IPT2 247 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 PGBD2Q6P3X8 592 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 TMEM65Q6PI78 240 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 GPAT4Q86UL3 456 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 COMMD7Q86VX2 200 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 OR7G2Q8NG99 324 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 PPCDCQ96CD2 204 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 TMEM41AQ96HV5 264 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 ZNF582Q96NG8 517 aaPredicted RBP9.66□□□□□ -0.86
DDX56-212ENST00000485367 SPOCK3Q9BQ16 436 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 FUZQ9BT04 418 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 HEXA-AS1Q9H8Q6 139 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 MYNNQ9NPC7 610 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 ZC4H2Q9NQZ6 224 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 KLRF1Q9NZS2 232 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 NUBP2Q9Y5Y2 271 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 ARHGAP21Q5T5U3 1957 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 TACC2O95359 2948 aa9.66□□□□□ -0.86
DDX56-212ENST00000485367 A0A0A6YYJ9 748 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 A0A0G2JNJ9 132 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 RPS10-NUDT3A0A1W2PQS6 291 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 TO15178 435 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 TLX2O43763 284 aaPredicted RBP9.65□□□□□ -0.86
DDX56-212ENST00000485367 AKAP8O43823 692 aaKnown RBP9.65□□□□□ -0.86
DDX56-212ENST00000485367 PLOD3O60568 738 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 ICOSLGO75144 302 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 OR5F1O95221 314 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms