RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 BCKDHAP12694 445 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 ZNF708P17019 499 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 PSMB1P20618 241 aaKnown RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 GTF2E2P29084 291 aaKnown RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 S100A3P33764 101 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 GRK5P34947 590 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CASP2P42575 452 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 OR3A3P47888 321 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 STARP49675 285 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CLCN7P51798 805 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 NKX2-5P52952 324 aaPredicted RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 MANFP55145 182 aaKnown RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 RAB25P57735 213 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SNRPD2P62316 118 aaKnown RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 MRPS15P82914 257 aaKnown RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SCN1BQ07699 218 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 FUT7Q11130 342 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CSTF3Q12996 717 aaKnown RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 GTF2H2Q13888 395 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 DGCR6Q14129 220 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 STK11Q15831 433 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SMN1Q16637 294 aaKnown RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 GPAT3Q53EU6 434 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 ESCO2Q56NI9 601 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 ARMCX4Q5H9R4 360 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SPANXN4Q5MJ08 99 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CTSL3PQ5NE16 218 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SLC25A30Q5SVS4 291 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 RUSC1-AS1Q66K80 236 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 C11orf71Q6IPW1 123 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 GTF2H2CQ6P1K8 395 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 RFPL4BQ6ZWI9 263 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 AHSA2Q719I0 299 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 HDDC2Q7Z4H3 204 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 NRARPQ7Z6K4 114 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SLC51BQ86UW2 128 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CA13Q8N1Q1 262 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CLDN22Q8N7P3 220 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 TOR1AIP2Q8NFQ8 470 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 OR52B6Q8NGF0 335 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 OR8J2Q8NGG1 315 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 OR4C15Q8NGM1 316 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 GTF3AQ92664 365 aaKnown RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SLC25A28Q96A46 364 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 TMEM186Q96B77 213 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CMTM7Q96FZ5 175 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 MAPKAP1Q9BPZ7 522 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SOX7Q9BT81 388 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 REXO4Q9GZR2 422 aaKnown RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 C6orf62Q9GZU0 229 aaPredicted RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SLC22A4Q9H015 551 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 ZNF556Q9HAH1 456 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 ISYNA1Q9NPH2 558 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 HIF1ANQ9NWT6 349 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 THUMPD1Q9NXG2 353 aaKnown RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 GPRC5BQ9NZH0 403 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 PTTG3PQ9NZH4 202 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CD274Q9NZQ7 290 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 PDP1Q9P0J1 537 aaPredicted RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SH3BP4Q9P0V3 963 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 ABCG2Q9UNQ0 655 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CORO2BQ9UQ03 480 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 CAB39Q9Y376 341 aaPredicted RBP5.57□□□□□ -1.52
CAPN13-206ENST00000485248 ZNF175Q9Y473 711 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 V9GYH0 126 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 V9GYQ6 96 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 SPACA6W5XKT8 324 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 NINQ8N4C6 2090 aa5.57□□□□□ -1.52
CAPN13-206ENST00000485248 LINC00862A6NCI5 91 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 B4DXG7 233 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 E5RI56 91 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 ZNF670-ZNF695F2Z2N8 137 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 MANBAO00462 879 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 TAPBPO15533 448 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 RAMP1O60894 148 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 ZNF780AO75290 641 aaPredicted RBP5.56□□□□□ -1.52
CAPN13-206ENST00000485248 CYP7B1O75881 506 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 PNPP00491 289 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 PRB2P02812 416 aaPredicted RBP5.56□□□□□ -1.52
CAPN13-206ENST00000485248 DBTP11182 482 aaKnown RBP5.56□□□□□ -1.52
CAPN13-206ENST00000485248 PRPS1L1P21108 318 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 C21orf33P30042 268 aaPredicted RBP5.56□□□□□ -1.52
CAPN13-206ENST00000485248 LHX2P50458 406 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 RORCP51449 518 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 RAB38P57729 211 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 SNRPGP62308 76 aaKnown RBP5.56□□□□□ -1.52
CAPN13-206ENST00000485248 TBPL1P62380 186 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 PSPHP78330 225 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 KCNJ10P78508 379 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 RBBP4Q09028 425 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 BAMBIQ13145 260 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 PON3Q15166 354 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 CNN3Q15417 329 aaKnown RBP5.56□□□□□ -1.52
CAPN13-206ENST00000485248 TAB1Q15750 504 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 TBRG1Q3YBR2 411 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.56□□□□□ -1.52
CAPN13-206ENST00000485248 NXNL2Q5VZ03 156 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 FAM219BQ5XKK7 198 aa5.56□□□□□ -1.52
CAPN13-206ENST00000485248 KLHL17Q6TDP4 642 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms