RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 HIST1H2ABP04908 130 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 ACHEP22303 614 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 NFYCQ13952 458 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 VMACQ2NL98 169 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 TMEM53Q6P2H8 277 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 DEF8Q6ZN54 512 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 HIST3H2AQ7L7L0 130 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 FGFBP3Q8TAT2 258 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 HIST1H2ACQ93077 130 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 SNX18Q96RF0 628 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 PRSS27Q9BQR3 290 aa9.84□□□□□ -0.83
SCFD1-206ENST00000484733 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.84□□□□□ -0.839e-7■■■■■ 35.8
SCFD1-206ENST00000484733 HMGB1P1B2RPK0 211 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-206ENST00000484733 B4DSR2 109 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 LYNX1G3V0Z9 82 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 FARS2O95363 451 aaKnown RBP9.83□□□□□ -0.84
SCFD1-206ENST00000484733 PTHP01270 115 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 LYNX1P0DP58 116 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 RBM34P42696 430 aaKnown RBP9.83□□□□□ -0.84
SCFD1-206ENST00000484733 TMEM33P57088 247 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 TRIP10Q15642 601 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 TSPYL5Q86VY4 417 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-206ENST00000484733 LRP11Q86VZ4 500 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 LIPHQ8WWY8 451 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 SYT3Q9BQG1 590 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 SERPINI2O75830 405 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 BCL10O95999 233 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 IGHG1P01857 330 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 TFP02787 698 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 HPXP02790 462 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 TSPAN19P0C672 248 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 ZNF250P15622 560 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 COL8A2P25067 703 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 ALDH3B1P43353 468 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 GPR6P46095 362 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-206ENST00000484733 SEC24CP53992 1094 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 HDDC2Q7Z4H3 204 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 CALHM3Q86XJ0 350 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 LRRC17Q8N6Y2 441 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 OR1J2Q8NGS2 313 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 OR10A6Q8NH74 314 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 VANGL1Q8TAA9 524 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-206ENST00000484733 SLC26A7Q8TE54 656 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 ZNF416Q9BWM5 594 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 MRPL13Q9BYD1 178 aaKnown RBP9.83□□□□□ -0.84
SCFD1-206ENST00000484733 MEPEQ9NQ76 525 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-206ENST00000484733 MYEF2Q9P2K5 600 aaKnown RBP9.83□□□□□ -0.84
SCFD1-206ENST00000484733 GPR160Q9UJ42 338 aa9.83□□□□□ -0.84
SCFD1-206ENST00000484733 IGLV3-9A0A075B6K5 115 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 EDF1O60869 148 aaKnown RBP9.82□□□□□ -0.84
SCFD1-206ENST00000484733 SNAP29O95721 258 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 QDPRP09417 244 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 CRYBA2P53672 197 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 UGT2B15P54855 530 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 RGS7BPQ6MZT1 257 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-206ENST00000484733 SLC30A7Q8NEW0 376 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 SH3GL1Q99961 368 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 NKIRAS2Q9NYR9 191 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 STX18Q9P2W9 335 aaKnown RBP9.82□□□□□ -0.84
SCFD1-206ENST00000484733 RP2O75695 350 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 OR7A10O76100 309 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 OR5F1O95221 314 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 NPPAP01160 153 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 MT-ND1P03886 318 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 PATE4P0C8F1 98 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 ZNF84P51523 738 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 SELENOVP59797 346 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 CYLC2Q14093 348 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-206ENST00000484733 MELKQ14680 651 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 MAD2L1BPQ15013 274 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-206ENST00000484733 SLC36A2Q495M3 483 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 COQ5Q5HYK3 327 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 C10orf128Q5T292 105 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 NANOGNBQ7Z5D8 188 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 GLCCI1Q86VQ1 547 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 CLDND2Q8NHS1 167 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 ZNF519Q8TB69 540 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 ASB10Q8WXI3 467 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 YIPF5Q969M3 257 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 MCHR2Q969V1 340 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 SH3GL3Q99963 347 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 RNF121Q9H920 327 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 MRGBPQ9NV56 204 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 SLCO1C1Q9NYB5 712 aa9.82□□□□□ -0.84
SCFD1-206ENST00000484733 A0A0A6YYJ9 748 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 A0A1W2PRG6 482 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 HTR3EA5X5Y0 456 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 NPIPB13A6NJU9 1138 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 NPIPB4C9JG80 1138 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 FBP2O00757 339 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 TCF21O43680 179 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 THRBP10828 461 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 SRP14P37108 136 aaKnown RBP9.81□□□□□ -0.84
SCFD1-206ENST00000484733 RAD52P43351 418 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 CLRN1P58418 232 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 MOGQ16653 247 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 TBC1D28Q2M2D7 210 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 PCGF3Q3KNV8 242 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 NANOGP8Q6NSW7 305 aa9.81□□□□□ -0.84
SCFD1-206ENST00000484733 SLC16A14Q7RTX9 510 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms