RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 OR10H5Q8NGA6 315 aa8.73□□□□□ -1.01
CPSF4-213ENST00000484112 SLC25A44Q96H78 314 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-213ENST00000484112 BTBD10Q9BSF8 475 aa8.73□□□□□ -1.01
CPSF4-213ENST00000484112 MMADHCQ9H3L0 296 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-213ENST00000484112 C20orf141Q9NUB4 165 aa8.73□□□□□ -1.01
CPSF4-213ENST00000484112 LPAR3Q9UBY5 353 aa8.73□□□□□ -1.01
CPSF4-213ENST00000484112 MGAT4BQ9UQ53 548 aa8.73□□□□□ -1.01
CPSF4-213ENST00000484112 STAB1Q9NY15 2570 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 A0A087WUU8 490 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 A0A096LNT2 108 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 SLC35F4A4IF30 521 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 AQP12BA6NM10 295 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 ZNF99A8MXY4 864 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-213ENST00000484112 E7EQL1 145 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 LRRN3E7EW58 273 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 BLOC1S5-TXNDC5H3BN57 136 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 J3KTA2 159 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 UPK3AO75631 287 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 RAD51DO75771 328 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 UBOX5O94941 541 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 BCL10O95999 233 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 IGHG1P01857 330 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 IGHMP01871 453 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 SAGP10523 405 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-213ENST00000484112 IFI30P13284 250 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 IFNGR1P15260 489 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 PTAFRP25105 342 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 TTKP33981 857 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 IFNGR2P38484 337 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 MAGEA2P43356 314 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 YAP1P46937 504 aaKnown RBP8.72□□□□□ -1.01
CPSF4-213ENST00000484112 DSCR9P59020 149 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 VLDLRP98155 873 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 ROR2Q01974 943 aaKnown RBP8.72□□□□□ -1.01
CPSF4-213ENST00000484112 RPL18Q07020 188 aaKnown RBP8.72□□□□□ -1.01
CPSF4-213ENST00000484112 LOXL1Q08397 574 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-213ENST00000484112 BNIP1Q12981 228 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 ZSCAN26Q16670 478 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 IQCCQ4KMZ1 466 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 FAM98BQ52LJ0 330 aaKnown RBP8.72□□□□□ -1.01
CPSF4-213ENST00000484112 SLC22A25Q6T423 547 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 TMEM108Q6UXF1 575 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 IL17RELQ6ZVW7 336 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 TSEN54Q7Z6J9 526 aaKnown RBP8.72□□□□□ -1.01
CPSF4-213ENST00000484112 AQP12AQ8IXF9 295 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 NRMQ8IXM6 262 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 FBXL14Q8N1E6 418 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 LRRC17Q8N6Y2 441 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 OR1K1Q8NGR3 316 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 PFN4Q8NHR9 129 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 SLC7A13Q8TCU3 470 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 FAM168AQ92567 244 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 ZNF566Q969W8 418 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 LRGUKQ96M69 825 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 ALKBH3Q96Q83 286 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-213ENST00000484112 SEPHS2Q99611 448 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 GRIP2Q9C0E4 1043 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 DENND2DQ9H6A0 471 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-213ENST00000484112 CHODLQ9H9P2 273 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 GPR35Q9HC97 309 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 SLC17A5Q9NRA2 495 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 INIPQ9NRY2 104 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 CBLN4Q9NTU7 201 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 NPAP1Q9NZP6 1156 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 SLC25A15Q9Y619 301 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 FREM1Q5H8C1 2179 aa8.72□□□□□ -1.01
CPSF4-213ENST00000484112 A0A1W2PR80 420 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 EFCAB9A8MZ26 197 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 C11orf98E9PRG8 122 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 AHCYL1O43865 530 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 LMX1BO60663 402 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 DNAJC8O75937 253 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-213ENST00000484112 GADD45GO95257 159 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 IGHV4-31P0DP07 118 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 HLA-DOBP13765 273 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 SLC25A16P16260 332 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 SRD5A1P18405 259 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 MSX2P35548 267 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-213ENST00000484112 CSNK1A1P48729 337 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 FABP6P51161 128 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 ZNF83P51522 516 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 HMGA2P52926 109 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 BIDP55957 195 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 UBE2NP61088 152 aaKnown RBP8.71□□□□□ -1.02
CPSF4-213ENST00000484112 CHRNB3Q05901 458 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 SPOCK1Q08629 439 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 HIST3H3Q16695 136 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 ALG10Q5BKT4 473 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 PGM2L1Q6PCE3 622 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 DPPA2Q7Z7J5 298 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 OAFQ86UD1 273 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 MUC15Q8N387 334 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 FAM86B1Q8N7N1 296 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 OR6N1Q8NGY5 312 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 OR52N5Q8NH56 324 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 TMEM54Q969K7 222 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 DHRS9Q9BPW9 319 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 FUZQ9BT04 418 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 THTPAQ9BU02 230 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 C1QTNF6Q9BXI9 259 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms