RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 JAM3Q9BX67 310 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 DCSTAMPQ9H295 470 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 PTGES2Q9H7Z7 377 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 ZDHHC11Q9H8X9 412 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 PLGRKTQ9HBL7 147 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 EXOSC4Q9NPD3 245 aaKnown RBP6.22□□□□□ -1.41
BRCA1-216ENST00000484087 NRIP3Q9NQ35 241 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 HAO2Q9NYQ3 351 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 GRHPRQ9UBQ7 328 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 CHRNA9Q9UGM1 479 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 STUB1Q9UNE7 303 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF835Q9Y2P0 537 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 LSM2Q9Y333 95 aaKnown RBP6.22□□□□□ -1.41
BRCA1-216ENST00000484087 CAB39Q9Y376 341 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-216ENST00000484087 TMED7Q9Y3B3 224 aa6.22□□□□□ -1.41
BRCA1-216ENST00000484087 SPIN1Q9Y657 262 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-216ENST00000484087 LRBAP50851 2863 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 ITPR2Q14571 2701 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 NAV2Q8IVL1 2488 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 CACNA1DQ01668 2161 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 IGKV1D-42A0A075B6H8 117 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 FAM90A27PA6NNH2 459 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 C12orf71A8MTZ7 269 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 MCIDASD6RGH6 385 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 PRSS44E7EML9 344 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 LRRN3E7EW58 273 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 ACOT7O00154 380 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 XKRYO14609 159 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 SUSD5O60279 629 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 TRIM3O75382 744 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-216ENST00000484087 TRAPPC6AO75865 159 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 RENP00797 406 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 IGHA1P01876 353 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 ASAH2BP0C7U1 165 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 HIST1H1CP16403 213 aaKnown RBP6.21□□□□□ -1.42
BRCA1-216ENST00000484087 CPEP16870 476 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 SDHAP31040 664 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 PTGS2P35354 604 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 APOBEC1P41238 236 aaKnown RBP6.21□□□□□ -1.42
BRCA1-216ENST00000484087 RPS5P46782 204 aaKnown RBP6.21□□□□□ -1.42
BRCA1-216ENST00000484087 TAS2R43P59537 309 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 CTXN1P60606 82 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 ERVK-25P63136 954 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 RBPJQ06330 500 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 SNTA1Q13424 505 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.21□□□□□ -1.42
BRCA1-216ENST00000484087 WIPI1Q5MNZ9 446 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-216ENST00000484087 FAM69AQ5T7M9 428 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 GPR139Q6DWJ6 353 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF585AQ6P3V2 769 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 TRILQ7L0X0 811 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 SHFQ7M4L6 423 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 YRDCQ86U90 279 aaKnown RBP6.21□□□□□ -1.42
BRCA1-216ENST00000484087 LHFPL3Q86UP9 236 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 IGFN1Q86VF2 1251 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 GPALPP1Q8IXQ4 340 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 FAM109AQ8N4B1 249 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 LRRC17Q8N6Y2 441 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 POMGNT2Q8NAT1 580 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 SDR9C7Q8NEX9 313 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 BBS1Q8NFJ9 593 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 OR10H4Q8NGA5 316 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 OR4K17Q8NGC6 315 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 OR6S1Q8NH40 331 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 NDNFQ8TB73 568 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 FAM57AQ8TBR7 257 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 TBC1D15Q8TC07 691 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 DYNC2LI1Q8TCX1 351 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 GATAD2BQ8WXI9 593 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 PTP4A1Q93096 173 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 DDIT4LQ96D03 193 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 KTI12Q96EK9 354 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-216ENST00000484087 ALG8Q9BVK2 526 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 WDR12Q9GZL7 423 aaKnown RBP6.21□□□□□ -1.42
BRCA1-216ENST00000484087 ENKD1Q9H0I2 346 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 OR51E2Q9H255 320 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 LDAHQ9H6V9 325 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 C12orf49Q9H741 205 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 EXO5Q9H790 373 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 HMG20AQ9NP66 347 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 SERINC1Q9NRX5 453 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 NDUFB11Q9NX14 153 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 ALKBH4Q9NXW9 302 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 FBXL2Q9UKC9 423 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 GSTK1Q9Y2Q3 226 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 MEMO1Q9Y316 297 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 FAM215AQ9Y5M1 114 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 CORINQ9Y5Q5 1042 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 WIF1Q9Y5W5 379 aa6.21□□□□□ -1.42
BRCA1-216ENST00000484087 HCFC1P51610 2035 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 TEX15Q9BXT5 2789 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 A0A1B0GUH1 482 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 NKX2-6A6NCS4 301 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 SHISA8B8ZZ34 492 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF208O43345 1280 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 RNF13O43567 381 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 SERPINI2O75830 405 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 MT-ND5P03915 603 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 SBK2P0C263 348 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms