RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 RABL2BQ9UNT1 228 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 MRPS33Q9Y291 106 aaKnown RBP13.47□□□□□ -0.25
ATG4B-220ENST00000482507 CCDC163A0A0D9SF12 145 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 OR5K4A6NMS3 321 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 RAB40ALP0C0E4 278 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 EFNB2P52799 333 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 AP3S2P59780 193 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 TSPAN5P62079 268 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 LYSMD4Q5XG99 296 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 NHLRC1Q6VVB1 395 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 LRRC69Q6ZNQ3 347 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 DNM1P46Q6ZS02 220 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 DPY19L4Q7Z388 723 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 FAM220AQ7Z4H9 259 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 OR2G2Q8NGZ5 317 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 RAB40AQ8WXH6 277 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 MMABQ96EY8 250 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-220ENST00000482507 DHRS9Q9BPW9 319 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 CLEC4MQ9H2X3 399 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-220ENST00000482507 KCNK15Q9H427 330 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 ZNF69Q9UC07 566 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 IKZF2Q9UKS7 526 aa13.47□□□□□ -0.25
ATG4B-220ENST00000482507 TRBV5-7A0A0A0MS05 114 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 I3L521 148 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 CLDN4O14493 209 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 GLSO94925 669 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-220ENST00000482507 TXNDC12O95881 172 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 IFNA7P01567 189 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 TACSTD2P09758 323 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 UBL4AP11441 157 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 AFF3P51826 1226 aaKnown RBP13.46□□□□□ -0.25
ATG4B-220ENST00000482507 WDR45BQ5MNZ6 344 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 PMS2CLQ68D20 193 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 KCTD20Q7Z5Y7 419 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 EID2Q8N6I1 236 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 OR6N2Q8NGY6 317 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 LMX1AQ8TE12 382 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 TAAR8Q969N4 342 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 CCDC120Q96HB5 630 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 RADILQ96JH8 1075 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 NKX3-1Q99801 234 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-220ENST00000482507 UTP23Q9BRU9 249 aaKnown RBP13.46□□□□□ -0.25
ATG4B-220ENST00000482507 NXF5Q9H1B4 397 aaKnown RBP13.46□□□□□ -0.25
ATG4B-220ENST00000482507 PCED1AQ9H1Q7 454 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 TAS2R5Q9NYW4 299 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 UBQLN2Q9UHD9 624 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 GMEB2Q9UKD1 530 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 MOKQ9UQ07 419 aa13.46□□□□□ -0.25
ATG4B-220ENST00000482507 THADAQ6YHU6 1953 aa13.46□□□□□ -0.26
ATG4B-220ENST00000482507 PLSCR5A0PG75 271 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 ACOT7O00154 380 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 NSA2O95478 260 aaKnown RBP13.45□□□□□ -0.26
ATG4B-220ENST00000482507 VSIG10L2P0DP72 767 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 PNMTP11086 282 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 APEHP13798 732 aaKnown RBP13.45□□□□□ -0.26
ATG4B-220ENST00000482507 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-220ENST00000482507 KIR3DL2P43630 455 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 NXPH1P58417 271 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 SMUG1Q53HV7 270 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 C1QL3Q5VWW1 255 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 CDH24Q86UP0 819 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 ZNF440Q8IYI8 595 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 UXS1Q8NBZ7 420 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 OR4D10Q8NGI6 311 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 FOXN4Q96NZ1 517 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 SYT4Q9H2B2 425 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 UBQLN4Q9NRR5 601 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 OR2M5A3KFT3 312 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 C17orf105B2RV13 164 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 PYCARD-AS1I3L0S3 204 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 NDUFB6O95139 128 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 IFNGR1P15260 489 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 ALOX5APP20292 161 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 TACR3P29371 465 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 ADH7P40394 386 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 MNDAP41218 407 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 GABRA4P48169 554 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 EPHA4P54764 986 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 C2orf68Q2NKX9 166 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 ZNF626Q68DY1 528 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 OR5M10Q6IEU7 315 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 PRR22Q8IZ63 422 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 SPICQ8N5J4 248 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 PTPMT1Q8WUK0 201 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-220ENST00000482507 TMEM106AQ96A25 262 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 OR1F2PQ96R84 312 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 GRHPRQ9UBQ7 328 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 LAMP5Q9UJQ1 280 aa13.45□□□□□ -0.26
ATG4B-220ENST00000482507 A8MUA0 341 aa13.44□□□□□ -0.26
ATG4B-220ENST00000482507 PATE3B3GLJ2 98 aa13.44□□□□□ -0.26
ATG4B-220ENST00000482507 M0R233 179 aa13.44□□□□□ -0.26
ATG4B-220ENST00000482507 SRPX2O60687 465 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-220ENST00000482507 UTS2O95399 124 aa13.44□□□□□ -0.26
ATG4B-220ENST00000482507 SLC37A1P57057 533 aa13.44□□□□□ -0.26
ATG4B-220ENST00000482507 OPCMLQ14982 345 aa13.44□□□□□ -0.26
ATG4B-220ENST00000482507 TOMM34Q15785 309 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-220ENST00000482507 AANATQ16613 207 aa13.44□□□□□ -0.26
ATG4B-220ENST00000482507 DEFB133Q30KQ1 61 aa13.44□□□□□ -0.26
ATG4B-220ENST00000482507 YOD1Q5VVQ6 348 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms