RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 IGSF10Q6WRI0 2623 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 TRBV2A0A0J9YWF9 115 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 A0A1W2PPC4 97 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 A0A1W2PRG6 482 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 C7orf66A4D0T2 115 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 HSPB2A8KAH6 182 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 B4DGG1 531 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 MCIDASD6RGH6 385 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 LRRN3E7EW58 273 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 H0YIG0 161 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SCDO00767 359 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 DVL2O14641 736 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 EEF1E1O43324 174 aaKnown RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 HCRTR1O43613 425 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 GSTZ1O43708 216 aaPredicted RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SCO2O43819 266 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 ITGA10O75578 1167 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SLPIP03973 132 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 GYPBP06028 91 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 CT45A8P0DMV1 189 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 CT45A9P0DMV2 189 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 UBL4AP11441 157 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SPI1P17947 270 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 FPR2P25090 351 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 EDNRAP25101 427 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SLC6A1P30531 599 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 GRK6P43250 576 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 CAPZBP47756 277 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 FASLGP48023 281 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SLC6A8P48029 635 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 GABRA4P48169 554 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 GZMKP49863 264 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 MMP15P51511 669 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 NOVA1P51513 510 aaKnown RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SLC25A1P53007 311 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 RAG2P55895 527 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 OR10A3P58181 314 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 RPS4XP62701 263 aaKnown RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SIRPAP78324 504 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 TNK1Q13470 666 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 C1orf61Q13536 156 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 EFR3AQ14156 821 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 ODF1Q14990 250 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 ELOCQ15369 112 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 HSPB2Q16082 182 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 CSRP2Q16527 193 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 NTRK2Q16620 822 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SLC25A35Q3KQZ1 300 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 PLA1AQ53H76 456 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 YIF1BQ5BJH7 314 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 CT45A2Q5DJT8 189 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF542PQ5EBM4 170 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 EMC4Q5J8M3 183 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 UBE2NLQ5JXB2 153 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 FAM27D1Q5T7N8 215 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 WBP2NLQ6ICG8 309 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 IL20RBQ6UXL0 311 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 MED25Q71SY5 747 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SSX6Q7RTT6 188 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 NUP54Q7Z3B4 507 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 FAM220AQ7Z4H9 259 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 KCTD20Q7Z5Y7 419 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 NR2C2APQ86WQ0 139 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF761Q86XN6 746 aaPredicted RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 GKN2Q86XP6 184 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SLC35F3Q8IY50 421 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 GPR135Q8IZ08 494 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SLC7A5P1Q8MH63 180 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 UBE2J2Q8N2K1 259 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 YIPF7Q8N8F6 280 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF615Q8N8J6 731 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 NPEPL1Q8NDH3 523 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 FAM71CQ8NEG0 241 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 C17orf47Q8NEP4 570 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 OR4N2Q8NGD1 307 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 C16orf52Q8NHV5 167 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SNX33Q8WV41 574 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 LIPHQ8WWY8 451 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 ADAMTS14Q8WXS8 1223 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 THAP4Q8WY91 577 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 DVL3Q92997 716 aaPredicted RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 C3orf49Q96BT1 292 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 PELI1Q96FA3 418 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 FYTTD1Q96QD9 318 aaKnown RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 OR2M2Q96R28 347 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 DDOQ99489 341 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 MNTQ99583 582 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 LRRC61Q9BV99 259 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SCNM1Q9BWG6 230 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 GPR174Q9BXC1 333 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 NMNAT2Q9BZQ4 307 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 ABCG5Q9H222 651 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 PPIL3Q9H2H8 161 aaKnown RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 LRRN3Q9H3W5 708 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 MARCH7Q9H992 704 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 NRIP3Q9NQ35 241 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SLC2A4RGQ9NR83 387 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 UBQLN4Q9NRR5 601 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF275Q9NSD4 429 aaPredicted RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 PAQR5Q9NXK6 330 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms