RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	SPEF1	Q9Y4P9	236 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	SNX13	Q9Y5W8	968 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	ABCA1	O95477	2261 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	NSD1	Q96L73	2696 aa	Predicted RBP	11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	hCG_2039718	K7EN88	272 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	PIP5K1C	O60331	668 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	TRMU	O75648	421 aa	Known RBP	11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	LY6H	O94772	140 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	SERPINA1	P01009	418 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	IFI30	P13284	250 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	NR4A1	P22736	598 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	PRDX6	P30041	224 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	PPOX	P50336	477 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	ZNF84	P51523	738 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	PSME3	P61289	254 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	KRTAP1-1	Q07627	177 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	SNTB2	Q13425	540 aa	Known RBP	11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	IFI44L	Q53G44	452 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	KRT80	Q6KB66	452 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	SKA3	Q8IX90	412 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	CDK20	Q8IZL9	346 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	OFCC1	Q8IZS5	231 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	SYT14	Q8NB59	555 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	NOXO1	Q8NFA2	376 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	MOSPD2	Q8NHP6	518 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	C10orf105	Q8TEF2	133 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	ASB10	Q8WXI3	467 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	MCHR2	Q969V1	340 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	ZNF347	Q96SE7	839 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	KCTD14	Q9BQ13	255 aa	Predicted RBP	11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	RAB1B	Q9H0U4	201 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	TMEM38B	Q9NVV0	291 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	RHCG	Q9UBD6	479 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	HIF3A	Q9Y2N7	669 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	CMAHP	Q9Y471	501 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	FN1	P02751	2386 aa	Known RBP	11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	TLN2	Q9Y4G6	2542 aa		11.94	□□□□□ -0.5
HDAC7-222	ENST00000477937	GMNC	A6NCL1	334 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	NPIPB13	A6NJU9	1138 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	NPIPB4	C9JG80	1138 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937		J3KTA2	159 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	CD5L	O43866	347 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	MGRN1	O60291	552 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	SNX3	O60493	162 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	SERPINA5	P05154	406 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	ERCC1	P07992	297 aa	Predicted RBP	11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	PATE4	P0C8F1	98 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	SAG	P10523	405 aa	Predicted RBP	11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	ZNF35	P13682	527 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	DRD4	P21917	467 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	LSP1	P33241	339 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	PDLIM4	P50479	330 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	MYBPC1	Q00872	1141 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	GALK2	Q01415	458 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	RUNX1T1	Q06455	604 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	LOXL1	Q08397	574 aa	Predicted RBP	11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	RAB39A	Q14964	217 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	TAF11	Q15544	211 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	NRN1L	Q496H8	165 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	ALG10	Q5BKT4	473 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	TMEM53	Q6P2H8	277 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	DPPA2	Q7Z7J5	298 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	RNF113B	Q8IZP6	322 aa	Known RBP	11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	OR4K5	Q8NGD3	323 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	FAM162A	Q96A26	154 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	HSH2D	Q96JZ2	352 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	TNFRSF13C	Q96RJ3	184 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	SEPHS2	Q99611	448 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	DOK1	Q99704	481 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	SH3GL3	Q99963	347 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	TXNIP	Q9H3M7	391 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	RNF121	Q9H920	327 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	ABCD2	Q9UBJ2	740 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937	RPS6KA6	Q9UK32	745 aa		11.93	□□□□□ -0.5
HDAC7-222	ENST00000477937		A0A096LNT2	108 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	TMEM129	A0AVI4	362 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	SH3PXD2B	A1X283	911 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	FFAR1	O14842	300 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	TLX2	O43763	284 aa	Predicted RBP	11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	GMNN	O75496	209 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	PTH	P01270	115 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	NR2C1	P13056	603 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	NCK1	P16333	377 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	ZNF133	P52736	654 aa	Predicted RBP	11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	PRKCD	Q05655	676 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	ANKDD1A	Q495B1	522 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	SLC36A2	Q495M3	483 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	ARMC4	Q5T2S8	1044 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	ZNF730	Q6ZMV8	503 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	RRM2B	Q7LG56	351 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	SLC16A14	Q7RTX9	510 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	CYP4Z1	Q86W10	505 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	SVOPL	Q8N434	492 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	ANKS4B	Q8N8V4	417 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	FGFBP3	Q8TAT2	258 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	PIMREG	Q9BSJ6	248 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	KCNN2	Q9H2S1	579 aa		11.92	□□□□□ -0.5
HDAC7-222	ENST00000477937	SPAG4	Q9NPE6	437 aa		11.92	□□□□□ -0.5

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