RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 SLC22A23A1A5C7 686 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 CDKN2AP42771 156 aaKnown RBP13.39□□□□□ -0.27
MCF2L-224ENST00000475524 ADORA2A-AS1P86434 159 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 TEKQ02763 1124 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 RUNX1T1Q06455 604 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 P2RY6Q15077 328 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 SNAPC1Q16533 368 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 FBXL19-AS1Q494R0 122 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 NRN1LQ496H8 165 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 TSPO2Q5TGU0 170 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 TMEM236Q5W0B7 351 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 LEG1Q6P5S2 330 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 XKRXQ6PP77 449 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 PTCHD4Q6ZW05 846 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 SLC37A3Q8NCC5 494 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 OR4K13Q8NH42 304 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 TMEM163Q8TC26 289 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 ZNF775Q96BV0 537 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-224ENST00000475524 BOD1Q96IK1 185 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 ULBP2Q9BZM5 246 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 NMNAT2Q9BZQ4 307 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 RACGAP1Q9H0H5 632 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 TVP23BQ9NYZ1 205 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 UPB1Q9UBR1 384 aa13.39□□□□□ -0.27
MCF2L-224ENST00000475524 RP1L1Q8IWN7 2480 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-224ENST00000475524 ZNF587BE7ETH6 402 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 PRODHO43272 600 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 COX5AP20674 150 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 BLVRAP53004 296 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 SNRPGP62308 76 aaKnown RBP13.38□□□□□ -0.27
MCF2L-224ENST00000475524 CD47Q08722 323 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 CRMP1Q14194 572 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 SLC35F1Q5T1Q4 408 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 ZNF691Q5VV52 312 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 SLC25A47Q6Q0C1 308 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 USP51Q70EK9 711 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 ZNF627Q7L945 461 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 ZBTB46Q86UZ6 589 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 ZNF808Q8N4W9 903 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-224ENST00000475524 FAM26EQ8N5C1 309 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 SDR9C7Q8NEX9 313 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 OR2T4Q8NH00 348 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 LILRB4Q8NHJ6 448 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 FAM81AQ8TBF8 368 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 CYGBQ8WWM9 190 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 NMNAT3Q96T66 252 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 USB1Q9BQ65 265 aaKnown RBP13.38□□□□□ -0.27
MCF2L-224ENST00000475524 C12orf49Q9H741 205 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 SLC7A10Q9NS82 523 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 ELOVL5Q9NYP7 299 aa13.38□□□□□ -0.27
MCF2L-224ENST00000475524 OR6C68A6NDL8 312 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 A8MXE2 369 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 PRR23D1E9PI22 279 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-224ENST00000475524 DHHO43323 396 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 KHDRBS3O75525 346 aaKnown RBP13.37□□□□□ -0.27
MCF2L-224ENST00000475524 KRT33AO76009 404 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 PRR23D2P0DMB1 279 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-224ENST00000475524 BMP5P22003 454 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 MPGP29372 298 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 ASCL1P50553 236 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 TGFBR3Q03167 851 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 TMED1Q13445 227 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 SLC35D3Q5M8T2 416 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 MEDAGQ5VYS4 303 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 NXNL2Q5VZ03 156 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 LRFN4Q6PJG9 635 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 FOXL2NBQ6ZUU3 175 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 CCDC71Q8IV32 467 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-224ENST00000475524 WDFY1Q8IWB7 410 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 GABRG1Q8N1C3 465 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 RELL2Q8NC24 303 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-224ENST00000475524 C1orf162Q8NEQ5 155 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-224ENST00000475524 MCHR2Q969V1 340 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 LRRC46Q96FV0 321 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 ANKRD60Q9BZ19 345 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 OR10A4Q9H209 315 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 SYT4Q9H2B2 425 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 Q9H521 79 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 GPR35Q9HC97 309 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 HINT3Q9NQE9 182 aaKnown RBP13.37□□□□□ -0.27
MCF2L-224ENST00000475524 TAS2R16Q9NYV7 291 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 MOKQ9UQ07 419 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 MYO7BQ6PIF6 2116 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 HIVEP3Q5T1R4 2406 aa13.37□□□□□ -0.27
MCF2L-224ENST00000475524 SPENQ96T58 3664 aaKnown RBP13.36□□□□□ -0.27
MCF2L-224ENST00000475524 PRKYO43930 277 aa13.36□□□□□ -0.27
MCF2L-224ENST00000475524 UPK3AO75631 287 aa13.36□□□□□ -0.27
MCF2L-224ENST00000475524 SMNDC1O75940 238 aaKnown RBP eCLIP13.36□□□□□ -0.27
MCF2L-224ENST00000475524 QDPRP09417 244 aa13.36□□□□□ -0.27
MCF2L-224ENST00000475524 GABRB1P18505 474 aa13.36□□□□□ -0.27
MCF2L-224ENST00000475524 ZNF84P51523 738 aa13.36□□□□□ -0.27
MCF2L-224ENST00000475524 ROR2Q01974 943 aaKnown RBP13.36□□□□□ -0.27
MCF2L-224ENST00000475524 LGALS3BPQ08380 585 aa13.36□□□□□ -0.27
MCF2L-224ENST00000475524 OCLNQ16625 522 aa13.36□□□□□ -0.27
MCF2L-224ENST00000475524 CARD17Q5XLA6 110 aa13.36□□□□□ -0.27
MCF2L-224ENST00000475524 NCCRP1Q6ZVX7 275 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-224ENST00000475524 CXXC5Q7LFL8 322 aaKnown RBP13.36□□□□□ -0.27
MCF2L-224ENST00000475524 GID4Q8IVV7 300 aa13.36□□□□□ -0.27
MCF2L-224ENST00000475524 C8orf59Q8N0T1 100 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-224ENST00000475524 UBE2J2Q8N2K1 259 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms