RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 TSPAN14Q8NG11 270 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 OR8D4Q8NGM9 314 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 MFSD8Q8NHS3 518 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 CNIH3Q8TBE1 160 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 ABHD3Q8WU67 409 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 IPCEF1Q8WWN9 437 aaPredicted RBP13.83□□□□□ -0.2
CPSF3-203ENST00000475482 TAAR8Q969N4 342 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 TNFRSF13CQ96RJ3 184 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 MRPS26Q9BYN8 205 aaKnown RBP13.83□□□□□ -0.2
CPSF3-203ENST00000475482 OR10A4Q9H209 315 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 PLCXD1Q9NUJ7 323 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 ZNF226Q9NYT6 803 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 KLHL13Q9P2N7 655 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 HDGFL3Q9Y3E1 203 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 PCDHGB5Q9Y5G0 923 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 DSCAMO60469 2012 aa13.83□□□□□ -0.2
CPSF3-203ENST00000475482 MRPS14O60783 128 aaKnown RBP13.82□□□□□ -0.2
CPSF3-203ENST00000475482 FAM20BO75063 409 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 OR6A2O95222 327 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 BGLAPP02818 100 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 THBDP07204 575 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 PPP3CBP16298 524 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 PSMB1P20618 241 aaKnown RBP13.82□□□□□ -0.2
CPSF3-203ENST00000475482 CRHBPP24387 322 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 RPS4XP62701 263 aaKnown RBP13.82□□□□□ -0.2
CPSF3-203ENST00000475482 POU4F3Q15319 338 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 OCLNQ16625 522 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 SYT14P1Q58G82 188 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 TMEM201Q5SNT2 666 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 ACSM5Q6NUN0 579 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 BEND4Q6ZU67 534 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 FCRLAQ7L513 359 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 IQCF1Q8N6M8 205 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 SCAIQ8N9R8 606 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 BPIFB6Q8NFQ5 453 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 OR5J2Q8NH18 312 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 TMEM163Q8TC26 289 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 RFKQ969G6 155 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 GPX7Q96SL4 187 aaPredicted RBP13.82□□□□□ -0.2
CPSF3-203ENST00000475482 MED18Q9BUE0 208 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 TMUB1Q9BVT8 246 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 FN3KQ9H479 309 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 BCO1Q9HAY6 547 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 VCX3AQ9NNX9 186 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 BATF3Q9NR55 127 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 KLHL21Q9UJP4 597 aa13.82□□□□□ -0.2
CPSF3-203ENST00000475482 FLNAP21333 2647 aaKnown RBP13.82□□□□□ -0.2
CPSF3-203ENST00000475482 CADP27708 2225 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 A0A1W2PNR3 127 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 RIIAD1A6NNX1 92 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 BLOC1S5-TXNDC5H3BN57 136 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 BHLHE40O14503 412 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 SURF4O15260 269 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 TLX2O43763 284 aaPredicted RBP13.81□□□□□ -0.2
CPSF3-203ENST00000475482 APEHP13798 732 aaKnown RBP13.81□□□□□ -0.2
CPSF3-203ENST00000475482 ZNF3P17036 446 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 GABRB1P18505 474 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 CD53P19397 219 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 PAICSP22234 425 aaKnown RBP13.81□□□□□ -0.2
CPSF3-203ENST00000475482 ENPP1P22413 925 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 TUBA4AP68366 448 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 ALG10Q5BKT4 473 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 TFAP2EQ6VUC0 442 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 NUFIP2Q7Z417 695 aaKnown RBP13.81□□□□□ -0.2
CPSF3-203ENST00000475482 TUSC5Q8IXB3 177 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 GABRG1Q8N1C3 465 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 LRRC17Q8N6Y2 441 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 ATP6V1C2Q8NEY4 427 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 MYDGFQ969H8 173 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 SLC25A36Q96CQ1 311 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 MOGAT1Q96PD6 335 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 IL4I1Q96RQ9 567 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 PTDSS2Q9BVG9 487 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 MRPL39Q9NYK5 338 aaKnown RBP13.81□□□□□ -0.2
CPSF3-203ENST00000475482 H2AFY2Q9P0M6 372 aaPredicted RBP13.81□□□□□ -0.2
CPSF3-203ENST00000475482 RPL36Q9Y3U8 105 aaKnown RBP13.81□□□□□ -0.2
CPSF3-203ENST00000475482 VPS13CQ709C8 3753 aa13.81□□□□□ -0.2
CPSF3-203ENST00000475482 ZFHX3Q15911 3703 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 IRGMA1A4Y4 181 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 ZC3H12DA2A288 527 aaKnown RBP13.8□□□□□ -0.2
CPSF3-203ENST00000475482 EFCAB10A6NFE3 127 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 TRIM64A6NGJ6 449 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 IMPA2O14732 288 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 ARPC3O15145 178 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 SMAD9O15198 467 aaKnown RBP13.8□□□□□ -0.2
CPSF3-203ENST00000475482 CYTIPO60759 359 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 WBP4O75554 376 aaKnown RBP13.8□□□□□ -0.2
CPSF3-203ENST00000475482 CLPTM1O96005 669 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 YES1P07947 543 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 TSPAN19P0C672 248 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 FMO3P31513 532 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 FXYD6P3P58550 94 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 PMS2P3Q13401 168 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 BLMHQ13867 455 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 DEFB113Q30KQ7 82 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 GPR139Q6DWJ6 353 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 TMPPEQ6ZT21 453 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 TGIF2LYQ8IUE0 185 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 GID4Q8IVV7 300 aa13.8□□□□□ -0.2
CPSF3-203ENST00000475482 ZNF540Q8NDQ6 660 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms