RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ATE1O95260 518 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 ACTL6AO96019 429 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 MT-ND5P03915 603 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 ADRB1P08588 477 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 CTLA4P16410 223 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 CPEP16870 476 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 EIF1AXP47813 144 aaKnown RBP12.25□□□□□ -0.45
TRAF4-210ENST00000475329 CD97P48960 835 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 LHX2P50458 406 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 SUCLG1P53597 346 aaKnown RBP12.25□□□□□ -0.45
TRAF4-210ENST00000475329 CLRN1P58418 232 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 ACTA2P62736 377 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 ACTG2P63267 376 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 SSX1Q16384 188 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 CTF1Q16619 201 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 LYPD4Q6UWN0 246 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 TIGD4Q8IY51 512 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 ZADH2Q8N4Q0 377 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 OR9K2Q8NGE7 335 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 UFD1Q92890 307 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 CPNE4Q96A23 557 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-210ENST00000475329 SLC25A44Q96H78 314 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-210ENST00000475329 INTS14Q96SY0 518 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 MNTQ99583 582 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 EMC6Q9BV81 110 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 SF3B5Q9BWJ5 86 aaKnown RBP12.25□□□□□ -0.45
TRAF4-210ENST00000475329 NDUFB11Q9NX14 153 aa12.25□□□□□ -0.45
TRAF4-210ENST00000475329 PCDHGA9Q9Y5G4 932 aaKnown RBP12.25□□□□□ -0.45
TRAF4-210ENST00000475329 DCHS1Q96JQ0 3298 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 SLC35F4A4IF30 521 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 TVP23AA6NH52 213 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 TRIM64BA6NI03 449 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 CENPBD1B2RD01 187 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 TFECO14948 347 aaPredicted RBP12.24□□□□□ -0.45
TRAF4-210ENST00000475329 SLC22A1O15245 554 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 AIREO43918 545 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 KHDRBS3O75525 346 aaKnown RBP12.24□□□□□ -0.45
TRAF4-210ENST00000475329 HLA-DQA2P01906 255 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 PGA4P0DJD7 388 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 PGA3P0DJD8 388 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 NR2C1P13056 603 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 ZNF708P17019 499 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 NR4A1P22736 598 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 HCCSP53701 268 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 CLDN17P56750 224 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 CLDN18P56856 261 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 RPS3AP61247 264 aaKnown RBP12.24□□□□□ -0.45
TRAF4-210ENST00000475329 BDH1Q02338 343 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 GLO1Q04760 184 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 FMODQ06828 376 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 AKAP13Q12802 2813 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 TPBGQ13641 420 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 BCL2A1Q16548 175 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 LIPKQ5VXJ0 399 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 ABLIM2Q6H8Q1 611 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 C19orf48Q6RUI8 117 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 IGFL3Q6UXB1 125 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 CREB3L2Q70SY1 520 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 SSX6Q7RTT6 188 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 CDC20BQ86Y33 519 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 KLBQ86Z14 1044 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 WDFY1Q8IWB7 410 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 SYS1Q8N2H4 156 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 RFLNBQ8N5W9 214 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 OR6N2Q8NGY6 317 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 NEIL3Q8TAT5 605 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 FNDC8Q8TC99 324 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 SMAP2Q8WU79 429 aaPredicted RBP12.24□□□□□ -0.45
TRAF4-210ENST00000475329 ABTB1Q969K4 478 aaPredicted RBP12.24□□□□□ -0.45
TRAF4-210ENST00000475329 RBP7Q96R05 134 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 MRPL13Q9BYD1 178 aaKnown RBP12.24□□□□□ -0.45
TRAF4-210ENST00000475329 CCDC86Q9H6F5 360 aaKnown RBP12.24□□□□□ -0.45
TRAF4-210ENST00000475329 EXO5Q9H790 373 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 ZDHHC11Q9H8X9 412 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 WDR76Q9H967 626 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 TRIM36Q9NQ86 728 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 FREM2Q5SZK8 3169 aa12.24□□□□□ -0.45
TRAF4-210ENST00000475329 ZNF407Q9C0G0 2248 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 ALPK2Q86TB3 2170 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 TRGV5A0A0B4J1U4 118 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 J3QLW9 94 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 PHYHO14832 338 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 RRP8O43159 456 aaKnown RBP12.23□□□□□ -0.45
TRAF4-210ENST00000475329 ZNF19P17023 458 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 ZNF24P17028 368 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 EIF2S3P41091 472 aaKnown RBP12.23□□□□□ -0.45
TRAF4-210ENST00000475329 CLDN15P56746 228 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 TAS2R43P59537 309 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 PMP22Q01453 160 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 AQP6Q13520 282 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 CAMK2DQ13557 499 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 SLC17A1Q14916 467 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 CDONQ4KMG0 1287 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 THEM4Q5T1C6 240 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 VASNQ6EMK4 673 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 ATCAYQ86WG3 371 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 PHC2Q8IXK0 858 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 SNX33Q8WV41 574 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 RPL3LQ92901 407 aaKnown RBP12.23□□□□□ -0.45
TRAF4-210ENST00000475329 PNPLA2Q96AD5 504 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms