RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CHN2P52757 468 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 ARFIP2P53365 341 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 CRYBA2P53672 197 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 NRN1LQ496H8 165 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 RABL3Q5HYI8 236 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 REP15Q6BDI9 236 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 LRFN4Q6PJG9 635 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 SKA3Q8IX90 412 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 ZCCHC24Q8N2G6 241 aaKnown RBP17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 HPS1Q92902 700 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 PRSS27Q9BQR3 290 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 TMEM38BQ9NVV0 291 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 STX18Q9P2W9 335 aaKnown RBP17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 REV1Q9UBZ9 1251 aa17.55■□□□□ 0.4
PDLIM4-206ENST00000474421 BLOC1S5-TXNDC5H3BN57 136 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 MGRN1O60291 552 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 QDPRP09417 244 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 THRBP10828 461 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 THBS2P35442 1172 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 DAP3P51398 398 aaKnown RBP17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 CLRN1P58418 232 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 KLF10Q13118 480 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 MELKQ14680 651 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 RAB39AQ14964 217 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 FXNQ16595 210 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 TMEM53Q6P2H8 277 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 UGT2A3Q6UWM9 527 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 MRPL37Q9BZE1 423 aaKnown RBP17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 C1orf198Q9H425 327 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 MEPEQ9NQ76 525 aaPredicted RBP17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 RIMS3Q9UJD0 308 aa17.54■□□□□ 0.4
PDLIM4-206ENST00000474421 SLC22A23A1A5C7 686 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 MCIDASD6RGH6 385 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 SASH3O75995 380 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 PTHP01270 115 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 TACSTD2P09758 323 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 SRD5A1P18405 259 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 FUT1P19526 365 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 IGFBP5P24593 272 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 ZNF84P51523 738 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 RPL18Q07020 188 aaKnown RBP17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 SLC36A2Q495M3 483 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 DEF8Q6ZN54 512 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 TMEM239Q8WW34 195 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 SGTBQ96EQ0 304 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 CHODLQ9H9P2 273 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 SAR1AQ9NR31 198 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 FGFR1OP2Q9NVK5 253 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 STAB1Q9NY15 2570 aa17.53■□□□□ 0.4
PDLIM4-206ENST00000474421 OR7A10O76100 309 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 TGFAP01135 160 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 IFNA8P32881 189 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 SELENOVP59797 346 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 HIST3H3Q16695 136 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 ZNF584Q8IVC4 421 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 OR1J2Q8NGS2 313 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 C10orf82Q8WW14 230 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 LIPHQ8WWY8 451 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 ZNF583Q96ND8 569 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 SYT3Q9BQG1 590 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 TPK1Q9H3S4 243 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 RNF121Q9H920 327 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 INIPQ9NRY2 104 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 ZNF346Q9UL40 294 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 AP3M1Q9Y2T2 418 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 MED31Q9Y3C7 131 aa17.52■□□□□ 0.4
PDLIM4-206ENST00000474421 SVEP1Q4LDE5 3571 aa17.52■□□□□ 0.39
PDLIM4-206ENST00000474421 HTR3EA5X5Y0 456 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 FAM220BPB1ANY3 271 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 PHF1O43189 567 aaPredicted RBP17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 IGFBP1P08833 259 aaPredicted RBP17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 PATE4P0C8F1 98 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 UGT2B15P54855 530 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 PIN1Q13526 163 aaPredicted RBP17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 RIN1Q13671 783 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 FAM120AOSQ5T036 256 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 SLC16A14Q7RTX9 510 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 NKAIN4Q8IVV8 208 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 SLC30A7Q8NEW0 376 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 NOXO1Q8NFA2 376 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 OR4K5Q8NGD3 323 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 PFN4Q8NHR9 129 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 TMEM255BQ8WV15 326 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 MCHR2Q969V1 340 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 SEPHS2Q99611 448 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 SH3GL3Q99963 347 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 MRPL13Q9BYD1 178 aaKnown RBP17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 LRMDAQ9H2I8 198 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 GPR160Q9UJ42 338 aa17.51■□□□□ 0.39
PDLIM4-206ENST00000474421 LOC100653049A0A140TA62 436 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 LRP5LA4QPB2 252 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 SLC22A2O15244 555 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 LILRA1O75019 489 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 KRT34O76011 436 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 F13BP05160 661 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 NR2C1P13056 603 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 ACADSP16219 412 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 TNFRSF1BP20333 461 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 APEX1P27695 318 aaKnown RBP17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 KDELR2P33947 212 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms