RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 OR4A15Q8NGL6 344 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 OR51F2Q8NH61 342 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 CLHC1Q8NHS4 586 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 MGARPQ8TDB4 240 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ZNF75CPQ92670 426 aaPredicted RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 NEUROG1Q92886 237 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 TESCQ96BS2 214 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 C3orf49Q96BT1 292 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ROPN1LQ96C74 230 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 TUBGCP3Q96CW5 907 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 COQ8BQ96D53 544 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 RAB39BQ96DA2 213 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 MSI2Q96DH6 328 aaKnown RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 C16orf58Q96GQ5 468 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 APOPT1Q96IL0 206 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 EGLN2Q96KS0 407 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 TRNT1Q96Q11 434 aaKnown RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 OR7D2Q96RA2 312 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ZNF300Q96RE9 604 aaPredicted RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 SDF2Q99470 211 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ZBTB18Q99592 522 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 THUMPD3Q9BV44 507 aaKnown RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 ZNF416Q9BWM5 594 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 SUCNR1Q9BXA5 334 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 LINC00470Q9BZP3 86 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 BPESC1Q9GZL8 116 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 C1orf198Q9H425 327 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ZNF385DQ9H6B1 395 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 B3GAT2Q9NPZ5 323 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 SIRT3Q9NTG7 399 aaPredicted RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 TBK1Q9UHD2 729 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 USP22Q9UPT9 525 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 FIS1Q9Y3D6 152 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 CCL27Q9Y4X3 112 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 DNAJC15Q9Y5T4 150 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 FLVCR1Q9Y5Y0 555 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 KIAA1549Q9HCM3 1950 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 MED12LQ86YW9 2145 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 ROS1P08922 2347 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 ABCA1O95477 2261 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 TMED7-TICAM2A0A0A6YYA0 188 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 NPIPA5A0A0B4J1W7 369 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 IGHV4-61A0A0C4DH41 118 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 PRSS51A0A1B0GVH4 220 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 AGAP5A6NIR3 686 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 NPIPA7E9PJI5 369 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 RPL36A-HNRNPH2H7BZ11 118 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 J3QLI3 93 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 hCG_2039718K7EN88 272 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 SYNGR3O43761 229 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 MGRN1O60291 552 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 SCN2BO60939 215 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 PEX11AO75192 247 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 AHSA1O95433 338 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 KRT75O95678 551 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 RAB36O95755 333 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 PNPP00491 289 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 IGKV3-15P01624 115 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 IGLV1-44P01699 117 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 IGHV3-9P01782 118 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 HNRNPCP07910 306 aaKnown RBP eCLIP3.02□□□□□ -1.93
XRN1-209ENST00000472625 MSMBP08118 114 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 LINC00032P0C843 101 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 MYZAPP0CAP1 466 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 NPIPA8P0DM63 369 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 SAGP10523 405 aaPredicted RBP3.02□□□□□ -1.93
XRN1-209ENST00000472625 LAMP1P11279 417 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 NR2C1P13056 603 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 ZNF43P17038 809 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 NCF2P19878 526 aaPredicted RBP3.02□□□□□ -1.93
XRN1-209ENST00000472625 RYKP34925 604 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 GPR6P46095 362 aaPredicted RBP3.02□□□□□ -1.93
XRN1-209ENST00000472625 CAPZA2P47755 286 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 IDH2P48735 452 aaKnown RBP3.02□□□□□ -1.93
XRN1-209ENST00000472625 CRISP3P54108 245 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 CLDN8P56748 225 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 TMEM33P57088 247 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 HILS1P60008 231 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 NCALDP61601 193 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 HBA1P69905 142 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 IL1RL1Q01638 556 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 NAAAQ02083 359 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 EMX2Q04743 252 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 SLC3A1Q07837 685 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 SPOCK1Q08629 439 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 SLC17A1Q14916 467 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 TOMM34Q15785 309 aaPredicted RBP3.02□□□□□ -1.93
XRN1-209ENST00000472625 ADIPOQQ15848 244 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 TBRG1Q3YBR2 411 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 GPAT3Q53EU6 434 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 RNASE12Q5GAN4 147 aaKnown RBP3.02□□□□□ -1.93
XRN1-209ENST00000472625 TSPO2Q5TGU0 170 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 GKAP1Q5VSY0 366 aaPredicted RBP3.02□□□□□ -1.93
XRN1-209ENST00000472625 IL23RQ5VWK5 629 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 TMEM225Q6GV28 225 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 WBP2NLQ6ICG8 309 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 TYW3Q6IPR3 259 aaKnown RBP3.02□□□□□ -1.93
XRN1-209ENST00000472625 RBMS3Q6XE24 437 aaKnown RBP3.02□□□□□ -1.93
XRN1-209ENST00000472625 B3GLCTQ6Y288 498 aa3.02□□□□□ -1.93
XRN1-209ENST00000472625 LRRC74BQ6ZQY2 392 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms