RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 IL20RAQ9UHF4 553 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 MAGED1Q9Y5V3 778 aaPredicted RBP17.27■□□□□ 0.36
HDAC7-220ENST00000471235 ROS1P08922 2347 aa17.27■□□□□ 0.35
HDAC7-220ENST00000471235 NAV2Q8IVL1 2488 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 ZNF503-AS2A6NEH8 195 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 A6NIZ1 184 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 DHHO43323 396 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 CIB2O75838 187 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 WNT11O96014 354 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 PLAUP00749 431 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 B4GALT1P15291 398 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 ZNF133P52736 654 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-220ENST00000471235 IST1P53990 364 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 UBE2NP61088 152 aaKnown RBP17.26■□□□□ 0.35
HDAC7-220ENST00000471235 RAP1BP61224 184 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 RAP1AP62834 184 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 FMODQ06828 376 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 GK3PQ14409 553 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 ZNF813Q6ZN06 617 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 ZNF704Q6ZNC4 412 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-220ENST00000471235 ZNF620Q6ZNG0 422 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 CLDN22Q8N7P3 220 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 ARIH2OSQ8N7S6 290 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 AQP11Q8NBQ7 271 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 MCHR2Q969V1 340 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 ZNF570Q96NI8 536 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 C1QTNF6Q9BXI9 259 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 OR52D1Q9H346 318 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 YY1AP1Q9H869 796 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 NRIP3Q9NQ35 241 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 RNF115Q9Y4L5 304 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 PLCE1Q9P212 2302 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 SPG11Q96JI7 2443 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 LRBAP50851 2863 aa17.26■□□□□ 0.35
HDAC7-220ENST00000471235 NOTCH2Q04721 2471 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 TEX13CA0A0J9YWL9 993 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 M0R1B8 84 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 SLC2A10O95528 541 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 CD3EP07766 207 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 HOXB1P14653 301 aaPredicted RBP17.25■□□□□ 0.35
HDAC7-220ENST00000471235 CD47Q08722 323 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 KRR1Q13601 381 aaKnown RBP17.25■□□□□ 0.35
HDAC7-220ENST00000471235 MICAQ29983 383 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 MESTQ5EB52 335 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 C10orf128Q5T292 105 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 TMEM179BQ7Z7N9 219 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 CDH24Q86UP0 819 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 OR10G2Q8NGC3 310 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 RASD2Q96D21 266 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 LIME1Q9H400 295 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 TMEM38BQ9NVV0 291 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 GRHPRQ9UBQ7 328 aa17.25■□□□□ 0.35
HDAC7-220ENST00000471235 CSMD2Q7Z408 3487 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 IGKV1D-43A0A0B4J1Z2 117 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 H7C1C5 153 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 TIPRLO75663 272 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 PPP1R3DO95685 299 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 GASTP01350 101 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 SDHAP31040 664 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 LCN6P62502 163 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 SPOCK1Q08629 439 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 ADAM5Q6NVV9 412 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 KLHL17Q6TDP4 642 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 PAMR1Q6UXH9 720 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 DPY19L2P2Q6ZN68 376 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 KBTBD8Q8NFY9 601 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 HTRA1Q92743 480 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 SMURF2Q9HAU4 748 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 DNAJB9Q9UBS3 223 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 CDH10Q9Y6N8 788 aa17.24■□□□□ 0.35
HDAC7-220ENST00000471235 GNGT2O14610 69 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 ARHGEF9O43307 516 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 NR2C1P13056 603 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 CD40P25942 277 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 SLC6A6P31641 620 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 ZNF84P51523 738 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 RFX4Q33E94 735 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 GPR139Q6DWJ6 353 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 SLC25A47Q6Q0C1 308 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 TMEM108Q6UXF1 575 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 GIPC3Q8TF64 312 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 GTPBP3Q969Y2 492 aaKnown RBP17.23■□□□□ 0.35
HDAC7-220ENST00000471235 SAMD8Q96LT4 415 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 DGCR6LQ9BY27 220 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 EGLN3Q9H6Z9 239 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 UBTD1Q9HAC8 227 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 NOX3Q9HBY0 568 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 ZNF224Q9NZL3 707 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 CRNNQ9UBG3 495 aaPredicted RBP17.23■□□□□ 0.35
HDAC7-220ENST00000471235 UGT2A1Q9Y4X1 527 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 IER3IP1Q9Y5U9 82 aa17.23■□□□□ 0.35
HDAC7-220ENST00000471235 IGHV1-18A0A0C4DH31 117 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 ARRDC5A6NEK1 342 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 SOCS2O14508 198 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 XKRYO14609 159 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 ABCD4O14678 606 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 TXNDC12O95881 172 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 HLA-HP01893 362 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 APEHP13798 732 aaKnown RBP17.22■□□□□ 0.35
HDAC7-220ENST00000471235 PTAFRP25105 342 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms