RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ACOXLQ9NUZ1 547 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 LAMP5Q9UJQ1 280 aa16.21■□□□□ 0.19
SMC4-211ENST00000469858 IGHV3-15A0A0B4J1V0 119 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 SEC14L5O43304 696 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 ZNF43P17038 809 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 CAPZA2P47755 286 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 CLDN20P56880 219 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 CSNK2A1P68400 391 aaPredicted RBP16.2■□□□□ 0.18
SMC4-211ENST00000469858 SLC3A1Q07837 685 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 GPR50Q13585 617 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 CD200R1LQ6Q8B3 271 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 NHLRC1Q6VVB1 395 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 UBQLNLQ8IYU4 475 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 DCLRE1CQ96SD1 692 aaKnown RBP16.2■□□□□ 0.18
SMC4-211ENST00000469858 ZNF703Q9H7S9 590 aaPredicted RBP16.2■□□□□ 0.18
SMC4-211ENST00000469858 MARCH7Q9H992 704 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 KLHL13Q9P2N7 655 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 B4GALT7Q9UBV7 327 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 COA3Q9Y2R0 106 aaPredicted RBP16.2■□□□□ 0.18
SMC4-211ENST00000469858 MRPS18CQ9Y3D5 142 aaKnown RBP16.2■□□□□ 0.18
SMC4-211ENST00000469858 PRR32B1ATL7 298 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 HLA-DPB1P04440 258 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 ENTPD1P49961 510 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 GBX2P52951 348 aaPredicted RBP16.2■□□□□ 0.18
SMC4-211ENST00000469858 H3F3AP84243 136 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 NHLH1Q02575 133 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 GLO1Q04760 184 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 CLN3Q13286 438 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 INSL4Q14641 139 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 DNM1P34Q6PK57 102 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 GALNTL5Q7Z4T8 443 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 MDS2Q8NDY4 140 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 MCFD2Q8NI22 146 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 DTNBP1Q96EV8 351 aa16.2■□□□□ 0.18
SMC4-211ENST00000469858 CCDC59Q9P031 241 aaKnown RBP16.2■□□□□ 0.18
SMC4-211ENST00000469858 TRDV1A0A1B0GX56 115 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 SLC35F4A4IF30 521 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 TRABD2BA6NFA1 517 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 CD8B2A6NJW9 211 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 GABRPO00591 440 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 EIF1AYO14602 144 aaKnown RBP16.19■□□□□ 0.18
SMC4-211ENST00000469858 EIF1BO60739 113 aaKnown RBP16.19■□□□□ 0.18
SMC4-211ENST00000469858 SP1P08047 785 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 CD8BP10966 210 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 PSKH1P11801 424 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 CD97P48960 835 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 BLVRAP53004 296 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 SOX8P57073 446 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 MFAP5Q13361 173 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 CAMK2DQ13557 499 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 PLEKHG7Q6ZR37 379 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 KCTD7Q96MP8 289 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 UCN2Q96RP3 112 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 TTTY12Q9BZ98 90 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 SLC24A3Q9HC58 644 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 MRPL22Q9NWU5 206 aaKnown RBP16.19■□□□□ 0.18
SMC4-211ENST00000469858 ST6GALNAC2Q9UJ37 374 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 KCNG2Q9UJ96 466 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 ING1Q9UK53 422 aaPredicted RBP16.19■□□□□ 0.18
SMC4-211ENST00000469858 RASD1Q9Y272 281 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 GSTK1Q9Y2Q3 226 aa16.19■□□□□ 0.18
SMC4-211ENST00000469858 IGKV1D-43A0A0B4J1Z2 117 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 METTL15A6NJ78 407 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 FAM166BA8MTA8 275 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 PLPP2O43688 288 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 POU3F2P20265 443 aaPredicted RBP16.18■□□□□ 0.18
SMC4-211ENST00000469858 RPS19P39019 145 aaKnown RBP16.18■□□□□ 0.18
SMC4-211ENST00000469858 PSMB10P40306 273 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 STARP49675 285 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 CCL11P51671 97 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 ADAM8P78325 824 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 ARG2P78540 354 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 MEP1BQ16820 701 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 TBC1D25Q3MII6 688 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 ZNF404Q494X3 552 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 SLC25A25Q6KCM7 469 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 GGNQ86UU5 652 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 THEM6Q8WUY1 208 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 NAA11Q9BSU3 229 aaPredicted RBP16.18■□□□□ 0.18
SMC4-211ENST00000469858 SRXN1Q9BYN0 137 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.18■□□□□ 0.187e-12■■■■■ 38.5
SMC4-211ENST00000469858 ZNF552Q9H707 407 aaPredicted RBP16.18■□□□□ 0.18
SMC4-211ENST00000469858 GALNT8Q9NY28 637 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 POLHQ9Y253 713 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 KLF13Q9Y2Y9 288 aaPredicted RBP16.18■□□□□ 0.18
SMC4-211ENST00000469858 ZNF593O00488 134 aaPredicted RBP16.18■□□□□ 0.18
SMC4-211ENST00000469858 NME2P1O60361 137 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 CDRT1O95170 752 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 IGHG1P01857 330 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 SPARCP09486 303 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 OR8G3PP0DMU2 310 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 ALOX5APP20292 161 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 NME2P22392 152 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 FGF9P31371 208 aaPredicted RBP16.18■□□□□ 0.18
SMC4-211ENST00000469858 SOX6P35712 828 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 OPRL1P41146 370 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 CLRN1P58418 232 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 PLGLB1Q02325 96 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 MXD1Q05195 221 aa16.18■□□□□ 0.18
SMC4-211ENST00000469858 MOGQ16653 247 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms