RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 HMGB1P1B2RPK0 211 aaPredicted RBP3.94□□□□□ -1.78
VPS8-219ENST00000469479 CLDN25C9JDP6 229 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 G3V4G9 280 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 CCDC188H7C350 402 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 SULT2B1O00204 365 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 BMPR1BO00238 502 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 GMFGO60234 142 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 RP2O75695 350 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 PSMG1O95456 288 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 CLDN9O95484 217 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 IGLV1-44P01699 117 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 IGHV3-9P01782 118 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 IGHV2-5P01817 119 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 MT-ND5P03915 603 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 CPT2P23786 658 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 NTSP30990 170 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 RAD52P43351 418 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 CLK1P49759 484 aaKnown RBP3.94□□□□□ -1.78
VPS8-219ENST00000469479 P2RX1P51575 399 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 TAS2R39P59534 338 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 SELENOVP59797 346 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 ZP1P60852 638 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 SLC3A1Q07837 685 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 SLC25A53Q5H9E4 307 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 TTC19Q6DKK2 380 aaPredicted RBP3.94□□□□□ -1.78
VPS8-219ENST00000469479 ZNF620Q6ZNG0 422 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 TMPPEQ6ZT21 453 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 OR2L13Q8N349 312 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 TEX9Q8N6V9 391 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 OR52N4Q8NGI2 321 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 OR9A2Q8NGT5 310 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 ST7LQ8TDW4 575 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 TMEM234Q8WY98 164 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 ST8SIA1Q92185 356 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 SGCDQ92629 289 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 ESAMQ96AP7 390 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 FAM71F1Q96KD3 344 aaPredicted RBP3.94□□□□□ -1.78
VPS8-219ENST00000469479 UBXN10Q96LJ8 280 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 OR5B2Q96R09 309 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 MRPL1Q9BYD6 325 aaKnown RBP3.94□□□□□ -1.78
VPS8-219ENST00000469479 RTN4RQ9BZR6 473 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 HOXD1Q9GZZ0 328 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 NMRAL1Q9HBL8 299 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 SLC35C2Q9NQQ7 365 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 NKIRAS2Q9NYR9 191 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 TXNDC16Q9P2K2 825 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 ZNF69Q9UC07 566 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 IL20RAQ9UHF4 553 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 ZDHHC2Q9UIJ5 367 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 GRID1Q9ULK0 1009 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 PACSIN2Q9UNF0 486 aaPredicted RBP3.94□□□□□ -1.78
VPS8-219ENST00000469479 HDGFL3Q9Y3E1 203 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 STAB2Q8WWQ8 2551 aa3.94□□□□□ -1.78
VPS8-219ENST00000469479 SH3PXD2BA1X283 911 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 SRRM5B3KS81 715 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 SUPT3HB4E1H0 165 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 C9JVG2 144 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 ZNF587BE7ETH6 402 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 LYNX1G3V0Z9 82 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 ANKRD28O15084 1053 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 EIF4E2O60573 245 aaKnown RBP3.93□□□□□ -1.78
VPS8-219ENST00000469479 SUPT3HO75486 399 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 KRT33AO76009 404 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 PMS2P2O95744 297 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 IGKV3-15P01624 115 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 KRT14P02533 472 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 CECR9P0C854 216 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 LYNX1P0DP58 116 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 HSD3B1P14060 373 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 CD1DP15813 335 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 STMN1P16949 149 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 TSPAN8P19075 237 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 OMGP23515 440 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 SHC1P29353 583 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 GABRA3P34903 492 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 ARR3P36575 388 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 ARL1P40616 181 aaPredicted RBP3.93□□□□□ -1.78
VPS8-219ENST00000469479 CCT5P48643 541 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 ALDH18A1P54886 795 aaKnown RBP3.93□□□□□ -1.78
VPS8-219ENST00000469479 GALNT1Q10472 559 aaPredicted RBP3.93□□□□□ -1.78
VPS8-219ENST00000469479 SNTB2Q13425 540 aaKnown RBP3.93□□□□□ -1.78
VPS8-219ENST00000469479 CBFBQ13951 182 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 OR4D1Q15615 310 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 TRIP13Q15645 432 aaPredicted RBP3.93□□□□□ -1.78
VPS8-219ENST00000469479 MOGQ16653 247 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 GGTA1PQ4G0N0 100 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 SYT14P1Q58G82 188 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 TECRLQ5HYJ1 363 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 PGBD2Q6P3X8 592 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 ZCCHC12Q6PEW1 402 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 C11orf88Q6PI97 169 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 APOOLQ6UXV4 268 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 WDFY1Q8IWB7 410 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 CDK20Q8IZL9 346 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 PDIK1LQ8N165 341 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 ZCCHC24Q8N2G6 241 aaKnown RBP3.93□□□□□ -1.78
VPS8-219ENST00000469479 RNF175Q8N4F7 328 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 NAT8LQ8N9F0 302 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 CDRT4Q8N9R6 151 aa3.93□□□□□ -1.78
VPS8-219ENST00000469479 OR4C3Q8NH37 302 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms