RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 PSMB1P20618 241 aaKnown RBP9.95□□□□□ -0.82
MSH5-214ENST00000468602 ACVR1BP36896 505 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 POLR2IP36954 125 aaKnown RBP9.95□□□□□ -0.82
MSH5-214ENST00000468602 CDKN2AP42771 156 aaKnown RBP9.95□□□□□ -0.82
MSH5-214ENST00000468602 SELENOPP49908 381 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 RUNX1T1Q06455 604 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 FOXD4Q12950 439 aaPredicted RBP9.95□□□□□ -0.82
MSH5-214ENST00000468602 ITGADQ13349 1161 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 TMED1Q13445 227 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 KRR1Q13601 381 aaKnown RBP9.95□□□□□ -0.82
MSH5-214ENST00000468602 FBXW10Q5XX13 1052 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 VWA1Q6PCB0 445 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 LRFN4Q6PJG9 635 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 SLC25A47Q6Q0C1 308 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 PLXDC2Q6UX71 529 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 PTCHD4Q6ZW05 846 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 WDFY1Q8IWB7 410 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 GCNT2Q8N0V5 402 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 DHRSXQ8N5I4 330 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 ACBD4Q8NC06 268 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 RELL2Q8NC24 303 aaPredicted RBP9.95□□□□□ -0.82
MSH5-214ENST00000468602 C1orf162Q8NEQ5 155 aaPredicted RBP9.95□□□□□ -0.82
MSH5-214ENST00000468602 SLC38A2Q96QD8 506 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 PROCRQ9UNN8 238 aa9.95□□□□□ -0.82
MSH5-214ENST00000468602 SPTBN1Q01082 2364 aaKnown RBP9.95□□□□□ -0.82
MSH5-214ENST00000468602 COL12A1Q99715 3063 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 TEX13CA0A0J9YWL9 993 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 XKRYO14609 159 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 PRODHO43272 600 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 HRGP04196 525 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 MPGP29372 298 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 CRABP1P29762 137 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 CSNK1A1P48729 337 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 BLVRAP53004 296 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 CDC42P60953 191 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.94□□□□□ -0.82
MSH5-214ENST00000468602 SNCBQ16143 134 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 KCNMB1Q16558 191 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 OCLNQ16625 522 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 LRRC36Q1X8D7 754 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 TSPO2Q5TGU0 170 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 NIPAL3Q6P499 406 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 C3P1Q6ZMU1 363 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 CCDC71Q8IV32 467 aaPredicted RBP9.94□□□□□ -0.82
MSH5-214ENST00000468602 LIX1LQ8IVB5 337 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 DEPDC4Q8N2C3 294 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 SLC37A3Q8NCC5 494 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 RHOXF1Q8NHV9 184 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 TMEM163Q8TC26 289 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 PTP4A1Q93096 173 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 RBP7Q96R05 134 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 ADI1Q9BV57 179 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 HDHD5Q9BXW7 423 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 MARCH7Q9H992 704 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 B3GAT2Q9NPZ5 323 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 SLC7A10Q9NS82 523 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 HAO2Q9NYQ3 351 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 COQ3Q9NZJ6 369 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 RAB26Q9ULW5 256 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 MOKQ9UQ07 419 aa9.94□□□□□ -0.82
MSH5-214ENST00000468602 CACNA1CQ13936 2221 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 IGLV1-36A0A0B4J1U3 117 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 OR6C68A6NDL8 312 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 RIIAD1A6NNX1 92 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 DHHO43323 396 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 UPK3AO75631 287 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 ZNF3P17036 446 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 SLC2A5P22732 501 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 EDNRAP25101 427 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 NOS3P29474 1203 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 CAPGP40121 348 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 PEX19P40855 299 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 ASCL1P50553 236 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 ISL1P61371 349 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 MRPS34P82930 218 aaKnown RBP9.93□□□□□ -0.82
MSH5-214ENST00000468602 SORDQ00796 357 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 TFF3Q07654 80 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 MELKQ14680 651 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 SLC35D3Q5M8T2 416 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 CLEC12AQ5QGZ9 265 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 AADACL4Q5VUY2 407 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 ZNF691Q5VV52 312 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 MEDAGQ5VYS4 303 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 NXNL2Q5VZ03 156 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 DNM1P34Q6PK57 102 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 ZNF474Q6S9Z5 364 aaPredicted RBP9.93□□□□□ -0.82
MSH5-214ENST00000468602 CASP12Q6UXS9 341 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 LINGO2Q7L985 606 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 IGFN1Q86VF2 1251 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 FJX1Q86VR8 437 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 P2RY8Q86VZ1 359 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 CCDC36Q8IYA8 594 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 ZNF100Q8IYN0 542 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 GALNT4Q8N4A0 578 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 C17orf78Q8N4C9 275 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 ZNF555Q8NEP9 628 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 PRR7Q8TB68 274 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 ITLN2Q8WWU7 325 aaPredicted RBP9.93□□□□□ -0.82
MSH5-214ENST00000468602 MCHR2Q969V1 340 aa9.93□□□□□ -0.82
MSH5-214ENST00000468602 RASD2Q96D21 266 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms