RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 GRIP2Q9C0E4 1043 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 TOR3AQ9H497 397 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 CMC2Q9NRP2 79 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 SLC22A23A1A5C7 686 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 CLEC18AA5D8T8 446 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 RPL36A-HNRNPH2H7BZ11 118 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 QDPRP09417 244 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 COX5AP20674 150 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 EPHA2P29317 976 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 MPGP29372 298 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 POLR2IP36954 125 aaKnown RBP13.41□□□□□ -0.26
SNIP1-202ENST00000468040 CDKN2AP42771 156 aaKnown RBP13.41□□□□□ -0.26
SNIP1-202ENST00000468040 PTDSS1P48651 473 aaKnown RBP13.41□□□□□ -0.26
SNIP1-202ENST00000468040 ZNF133P52736 654 aaPredicted RBP13.41□□□□□ -0.26
SNIP1-202ENST00000468040 SH3BGRP55822 239 aaPredicted RBP13.41□□□□□ -0.26
SNIP1-202ENST00000468040 ROR2Q01974 943 aaKnown RBP13.41□□□□□ -0.26
SNIP1-202ENST00000468040 TGFBR3Q03167 851 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 LGALS3BPQ08380 585 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 ZIK1Q3SY52 487 aaPredicted RBP13.41□□□□□ -0.26
SNIP1-202ENST00000468040 TMEM236Q5W0B7 351 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 C12orf73Q69YU5 71 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 LEG1Q6P5S2 330 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 DNM1P34Q6PK57 102 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 CLEC18BQ6UXF7 455 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 PTCHD4Q6ZW05 846 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 CLEC18CQ8NCF0 446 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 SDR9C7Q8NEX9 313 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 MCHR2Q969V1 340 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 NMD3Q96D46 503 aaKnown RBP13.41□□□□□ -0.26
SNIP1-202ENST00000468040 PLEKHA8Q96JA3 519 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 MBOAT4Q96T53 435 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 NMNAT3Q96T66 252 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 RASSF4Q9H2L5 321 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 CRLF2Q9HC73 371 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 GPR35Q9HC97 309 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 TAS2R16Q9NYV7 291 aa13.41□□□□□ -0.26
SNIP1-202ENST00000468040 VSX1Q9NZR4 365 aaPredicted RBP13.41□□□□□ -0.26
SNIP1-202ENST00000468040 NKX2-6A6NCS4 301 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 H0YJX3 145 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 H7C1C5 153 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 SURF4O15260 269 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 PAICSP22234 425 aaKnown RBP13.4□□□□□ -0.26
SNIP1-202ENST00000468040 IGHV1-2P23083 117 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 CRABP1P29762 137 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 CD79BP40259 229 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 LCN6P62502 163 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 SRSF1Q07955 248 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNIP1-202ENST00000468040 CDSNQ15517 529 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 PHYHD1Q5SRE7 291 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 ZNF362Q5T0B9 420 aaPredicted RBP13.4□□□□□ -0.26
SNIP1-202ENST00000468040 FBXW10Q5XX13 1052 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 LRFN4Q6PJG9 635 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 SLC37A3Q8NCC5 494 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 NPEPL1Q8NDH3 523 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 ZNF555Q8NEP9 628 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 RNASE6Q93091 150 aaKnown RBP13.4□□□□□ -0.26
SNIP1-202ENST00000468040 HRASLS5Q96KN8 279 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 HDHD5Q9BXW7 423 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 SYT4Q9H2B2 425 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 GALNT8Q9NY28 637 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 TVP23BQ9NYZ1 205 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 RELNP78509 3460 aa13.4□□□□□ -0.26
SNIP1-202ENST00000468040 DIDO1Q9BTC0 2240 aaKnown RBP13.39□□□□□ -0.27
SNIP1-202ENST00000468040 OR6C68A6NDL8 312 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 ZNF99A8MXY4 864 aaPredicted RBP13.39□□□□□ -0.27
SNIP1-202ENST00000468040 DLGAP1O14490 977 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 DHHO43323 396 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 PSMB1P20618 241 aaKnown RBP13.39□□□□□ -0.27
SNIP1-202ENST00000468040 ZNF84P51523 738 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 CDC42P60953 191 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 FMODQ06828 376 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 CRMP1Q14194 572 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 SNAPC1Q16533 368 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 CEACAM16Q2WEN9 425 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 C10orf128Q5T292 105 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 SFRP5Q5T4F7 317 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 LINGO2Q7L985 606 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 CXorf67Q86X51 503 aaPredicted RBP13.39□□□□□ -0.27
SNIP1-202ENST00000468040 C1orf162Q8NEQ5 155 aaPredicted RBP13.39□□□□□ -0.27
SNIP1-202ENST00000468040 OR2T4Q8NH00 348 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 KISS1RQ969F8 398 aaPredicted RBP13.39□□□□□ -0.27
SNIP1-202ENST00000468040 PITX2Q99697 317 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 USB1Q9BQ65 265 aaKnown RBP13.39□□□□□ -0.27
SNIP1-202ENST00000468040 FN3KQ9H479 309 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 FAM118AQ9NWS6 357 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 IMPAD1Q9NX62 359 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 NDRG4Q9ULP0 352 aaKnown RBP13.39□□□□□ -0.27
SNIP1-202ENST00000468040 GPR52Q9Y2T5 361 aa13.39□□□□□ -0.27
SNIP1-202ENST00000468040 LOC100130705A0A1B0GUX0 176 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 CIB4A0PJX0 185 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 E9PQ18 207 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 C16orf97H3BN30 126 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 SLC16A6O15403 523 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 SLC16A7O60669 478 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 KHDRBS3O75525 346 aaKnown RBP13.38□□□□□ -0.27
SNIP1-202ENST00000468040 SLC2A10O95528 541 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 ITGA5P08648 1049 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 GGT2P36268 569 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 VHLP40337 213 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 SLC25A1P53007 311 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms