RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 LKAAEAR1Q8TD35 194 aa3.32□□□□□ -1.88
GAPVD1-211ENST00000467707 RNF185Q96GF1 192 aa3.32□□□□□ -1.88
GAPVD1-211ENST00000467707 CHP1Q99653 195 aa3.32□□□□□ -1.88
GAPVD1-211ENST00000467707 ATP5SQ99766 215 aa3.32□□□□□ -1.88
GAPVD1-211ENST00000467707 FAM192AQ9GZU8 254 aa3.32□□□□□ -1.88
GAPVD1-211ENST00000467707 NEK6Q9HC98 313 aa3.32□□□□□ -1.88
GAPVD1-211ENST00000467707 RAB20Q9NX57 234 aa3.32□□□□□ -1.88
GAPVD1-211ENST00000467707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.32□□□□□ -1.88
GAPVD1-211ENST00000467707 CHD4Q14839 1912 aa3.32□□□□□ -1.88
GAPVD1-211ENST00000467707 ASTN1O14525 1302 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 A0A075B6Q4 140 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 IGKV1D-13A0A0B4J2D9 117 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 PRSS37A4D1T9 235 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 LRRIQ3A6PVS8 624 aaPredicted RBP3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 SGK1O00141 431 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 CLOCKO15516 846 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 SLC25A27O95847 323 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 C6orf47O95873 294 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 FTH1P02794 183 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 IGKV1-13P0DP09 117 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 CALM1P0DP23 149 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 CALM2P0DP24 149 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 CALM3P0DP25 149 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 OMGP23515 440 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 NSG1P42857 185 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 RORCP51449 518 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 MNAT1P51948 309 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 RPS21P63220 83 aaKnown RBP3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 HMGCS1Q01581 520 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 CUL2Q13617 745 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 PSG5Q15238 335 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 GUCA2BQ16661 112 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 HSP90AB3PQ58FF7 597 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 SPANXN2Q5MJ10 180 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 C9orf135Q5VTT2 229 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 SASS6Q6UVJ0 657 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 C19orf35Q6ZS72 473 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 NIPA1Q7RTP0 329 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 GTPBP8Q8N3Z3 284 aaPredicted RBP3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 MREGQ8N565 214 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 ARIH2OSQ8N7S6 290 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 OR1S2Q8NGQ3 325 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 ACTRT1Q8TDG2 376 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 TGS1Q96RS0 853 aaKnown RBP3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 P2RX4Q99571 388 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 DNTTIP1Q9H147 329 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 VPS37BQ9H9H4 285 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 UGT1A7Q9HAW7 530 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 UGT1A10Q9HAW8 530 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 UGT1A8Q9HAW9 530 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 DEC1Q9P2X7 70 aa3.31□□□□□ -1.88
GAPVD1-211ENST00000467707 CARMIL3Q8ND23 1372 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 CENPJQ9HC77 1338 aaPredicted RBP3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 IGLV11-55A0A075B6I3 123 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 SUPT3HO75486 399 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 PLEKP08567 350 aaPredicted RBP3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 RPS10P46783 165 aaKnown RBP3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 RAB10P61026 200 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 HERVK_113P61574 105 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 ECH1Q13011 328 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 TMEM183BQ1AE95 376 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 TTLL9Q3SXZ7 439 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 PRAMEF20Q5VT98 475 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 LRRC66Q68CR7 880 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 ZNF836Q6ZNA1 936 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 ABHD13Q7L211 337 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 TMEM183AQ8IXX5 376 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 OR10R2Q8NGX6 335 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 ACMSDQ8TDX5 336 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 GABARAPL3Q9BY60 117 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 SAMSN1Q9NSI8 373 aaKnown RBP3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 ING4Q9UNL4 249 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 NEU3Q9UQ49 428 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
GAPVD1-211ENST00000467707 PHF3Q92576 2039 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 NDUFAB1O14561 156 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 AIM2O14862 343 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 RAB29O14966 203 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 PPP1R2P9O14990 202 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 ICOSLGO75144 302 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 SS18L1O75177 396 aaPredicted RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 OR2J3O76001 311 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 PABPC4LP0CB38 370 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 TOP1P11387 765 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 EIF2S2P20042 333 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 TMED10P49755 219 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 RGS8P57771 180 aaPredicted RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 MECOMQ03112 1051 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 TCP10Q12799 353 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 ANKRD26P1Q6NSI1 321 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 Q6ZSR3 168 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 KRTAP11-1Q8IUC1 163 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 ZNF433Q8N7K0 673 aaPredicted RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 Q8N9L7 120 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 FBXL13Q8NEE6 735 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 DUSP18Q8NEJ0 188 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 TSEN15Q8WW01 171 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 GIMAP1Q8WWP7 306 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 SRSF12Q8WXF0 261 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 MRPL37Q9BZE1 423 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms