RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 SPOCK1Q08629 439 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 ZNF813Q6ZN06 617 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 RNF113BQ8IZP6 322 aaKnown RBP12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 MAGEE2Q8TD90 523 aaPredicted RBP12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 LIPHQ8WWY8 451 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 ACOT11Q8WXI4 607 aaPredicted RBP12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 TMEM54Q969K7 222 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 ZNF566Q969W8 418 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 SLC25A44Q96H78 314 aaPredicted RBP12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 C7orf34Q96L11 122 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 TNFRSF13CQ96RJ3 184 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 CACNG6Q9BXT2 260 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 NELFAQ9H3P2 528 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 TMEM160Q9NX00 188 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 GLTPQ9NZD2 209 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 NDUFAF4Q9P032 175 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 FBXO9Q9UK97 447 aaPredicted RBP12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 ATP23Q9Y6H3 246 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 PMF1-BGLAPU3KQ54 211 aa12.24□□□□□ -0.45
CCHCR1-211ENST00000467553 CUBNO60494 3623 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 ARPC4-TTLL3A0A0A6YYG9 625 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 HTR3EA5X5Y0 456 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 A8MV72 311 aaPredicted RBP12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 EFCAB9A8MZ26 197 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 SSX4O60224 188 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 H1F0P07305 194 aaKnown RBP12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 T-ENOLP0DO92 83 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 CALB2P22676 271 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 APOBEC3AP31941 199 aaPredicted RBP12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 CLRN1P58418 232 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 VLDLRP98155 873 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 MYBPC1Q00872 1141 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 LOXL1Q08397 574 aaPredicted RBP12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 FXNQ16595 210 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 SPATS1Q496A3 300 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 ALG10Q5BKT4 473 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 FGD3Q5JSP0 725 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 CYP2R1Q6VVX0 501 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 MBOAT2Q6ZWT7 520 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 OAFQ86UD1 273 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 SYT14Q8NB59 555 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 OR52J3Q8NH60 311 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 OR51A7Q8NH64 312 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 MCUR1Q96AQ8 359 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 SLC38A2Q96QD8 506 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 KCNS3Q9BQ31 491 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 GDF2Q9UK05 429 aaPredicted RBP12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 MOKQ9UQ07 419 aa12.23□□□□□ -0.45
CCHCR1-211ENST00000467553 TRAV27A0A087WT01 109 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 IGHV1-18A0A0C4DH31 117 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 IGHG1P01857 330 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 QDPRP09417 244 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 PGA4P0DJD7 388 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 PGA3P0DJD8 388 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 CD79AP11912 226 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 ACADSP16219 412 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 ITGA2P17301 1181 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 GPR4P46093 362 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 EFNA4P52798 201 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 CTXN1P60606 82 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 RUNX1T1Q06455 604 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 PIGFQ07326 219 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 C3orf36Q3SXR2 165 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 LRFN4Q6PJG9 635 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 IGFN1Q86VF2 1251 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 MAPK1IP1LQ8NDC0 245 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 SLC7A13Q8TCU3 470 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 ASB10Q8WXI3 467 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 ZNF347Q96SE7 839 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 FOXB1Q99853 325 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 ANKRD19PQ9H560 264 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 YAE1D1Q9NRH1 226 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 ZNF346Q9UL40 294 aaKnown RBP12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 FBN3Q75N90 2809 aa12.22□□□□□ -0.45
CCHCR1-211ENST00000467553 TRBV4-1A0A0J9YWV2 114 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 ZNF503-AS2A6NEH8 195 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 ATP6V1G2-DDX39BF2Z307 99 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 DHHO43323 396 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 NDUFS7O75251 213 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 TRMUO75648 421 aaKnown RBP12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 HLA-HP01893 362 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 TSPAN19P0C672 248 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 B4GALT1P15291 398 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 CBR1P16152 277 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 DAP3P51398 398 aaKnown RBP12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 IDH3GP51553 393 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 NPRL3Q12980 569 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 TOP3AQ13472 1001 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 CHRFAM7AQ494W8 412 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 TRPM8Q7Z2W7 1104 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 CCDC36Q8IYA8 594 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 MCHR2Q969V1 340 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 FAM46AQ96IP4 442 aaKnown RBP12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 SEPHS2Q99611 448 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 TXNIPQ9H3M7 391 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 TAS2R1Q9NYW7 299 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 LPAR3Q9UBY5 353 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 CDC42EP3Q9UKI2 254 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 HIF3AQ9Y2N7 669 aa12.21□□□□□ -0.45
CCHCR1-211ENST00000467553 YLPM1P49750 1951 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms