RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SNX3O60493 162 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 TRMUO75648 421 aaKnown RBP18.82■□□□□ 0.6
LIME1-203ENST00000465591 PRSS23O95084 383 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 F12P00748 615 aaPredicted RBP18.82■□□□□ 0.6
LIME1-203ENST00000465591 SERPINA1P01009 418 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 BMP4P12644 408 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 MAKP20794 623 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 PSME3P61289 254 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 RAB1AP62820 205 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 SNTB2Q13425 540 aaKnown RBP18.82■□□□□ 0.6
LIME1-203ENST00000465591 ARMC4Q5T2S8 1044 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 KRT80Q6KB66 452 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 PIWIL3Q7Z3Z3 882 aaKnown RBP18.82■□□□□ 0.6
LIME1-203ENST00000465591 ZNF584Q8IVC4 421 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 OFCC1Q8IZS5 231 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 SLC22A24Q8N4F4 322 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 SYT14Q8NB59 555 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 NOXO1Q8NFA2 376 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 C10orf105Q8TEF2 133 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 LZICQ8WZA0 190 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 MCHR2Q969V1 340 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 HSH2DQ96JZ2 352 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 SH3GL3Q99963 347 aa18.82■□□□□ 0.6
LIME1-203ENST00000465591 A0A1W2PRG6 482 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 GSTA4O15217 222 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 IGHG1P01857 330 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 IFNW1P05000 195 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 IGFBP1P08833 259 aaPredicted RBP18.81■□□□□ 0.6
LIME1-203ENST00000465591 IFI30P13284 250 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 ZNF35P13682 527 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 CLRN1P58418 232 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 DAG1Q14118 895 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 RAB39AQ14964 217 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 IFI44LQ53G44 452 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 NRMQ8IXM6 262 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 SVOPLQ8N434 492 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 GEMIN6Q8WXD5 167 aaKnown RBP18.81■□□□□ 0.6
LIME1-203ENST00000465591 FAM168AQ92567 244 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 BPIFA2Q96DR5 249 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 DOK1Q99704 481 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 VRK1Q99986 396 aaPredicted RBP18.81■□□□□ 0.6
LIME1-203ENST00000465591 ADAM21Q9UKJ8 722 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 HIF3AQ9Y2N7 669 aa18.81■□□□□ 0.6
LIME1-203ENST00000465591 IGKV1D-43A0A0B4J1Z2 117 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 MCIDASD6RGH6 385 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 hCG_2039718K7EN88 272 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 UBL3O95164 117 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 ACADSP16219 412 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 NPR2P20594 1047 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 NR4A1P22736 598 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 DSCR9P59020 149 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 FHL1Q13642 323 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 ZCCHC24Q8N2G6 241 aaKnown RBP18.8■□□□□ 0.6
LIME1-203ENST00000465591 IL17RDQ8NFM7 739 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 OR4K5Q8NGD3 323 aa18.8■□□□□ 0.6
LIME1-203ENST00000465591 HDAC2Q92769 488 aaKnown RBP18.8■□□□□ 0.6
LIME1-203ENST00000465591 NMD3Q96D46 503 aaKnown RBP18.8■□□□□ 0.6
LIME1-203ENST00000465591 KCTD14Q9BQ13 255 aaPredicted RBP18.8■□□□□ 0.6
LIME1-203ENST00000465591 MALRD1Q5VYJ5 2156 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 SLC2A10O95528 541 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 RAB36O95755 333 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 OR8G3PP0DMU2 310 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 DAP3P51398 398 aaKnown RBP18.79■□□□□ 0.6
LIME1-203ENST00000465591 ZNF133P52736 654 aaPredicted RBP18.79■□□□□ 0.6
LIME1-203ENST00000465591 TRAM2Q15035 370 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 TBPL2Q6SJ96 375 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 IGFN1Q86VF2 1251 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 PRIMA1Q86XR5 153 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 CDK20Q8IZL9 346 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 LRRC75AQ8NAA5 344 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 FAM162AQ96A26 154 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 CMTM5Q96DZ9 223 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 FNDC11Q9BVV2 318 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 EGFL7Q9UHF1 273 aa18.79■□□□□ 0.6
LIME1-203ENST00000465591 A0A087WUU8 490 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 CD5LO43866 347 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 PRDX6P30041 224 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 PPOXP50336 477 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 PPP2R2BQ00005 443 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 PRKCDQ05655 676 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 FMODQ06828 376 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 TOP3AQ13472 1001 aaPredicted RBP18.78■□□□□ 0.6
LIME1-203ENST00000465591 ALG10Q5BKT4 473 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 FKBP9P1Q75LS8 142 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 RNF148Q8N7C7 305 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 CLDN22Q8N7P3 220 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 TXNIPQ9H3M7 391 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 DENND2DQ9H6A0 471 aaPredicted RBP18.78■□□□□ 0.6
LIME1-203ENST00000465591 UGT2A1Q9Y4X1 527 aa18.78■□□□□ 0.6
LIME1-203ENST00000465591 TRAV27A0A087WT01 109 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 SH3PXD2BA1X283 911 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 NPIPB13A6NJU9 1138 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 CENPBD1B2RD01 187 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 VWC2LB2RUY7 222 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 NPIPB4C9JG80 1138 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 SERPINA5P05154 406 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 SLC25A16P16260 332 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 CDAP32320 146 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 LOXL1Q08397 574 aaPredicted RBP18.77■□□□□ 0.6
LIME1-203ENST00000465591 FXNQ16595 210 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms