RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TSSK2Q96PF2 358 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 TSPAN32Q96QS1 320 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 ALG12Q9BV10 488 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 SCNM1Q9BWG6 230 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 ANGPTL4Q9BY76 406 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 FKRPQ9H9S5 495 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 INIPQ9NRY2 104 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 ZNF346Q9UL40 294 aaKnown RBP13.06□□□□□ -0.32
COL5A1-205ENST00000464187 PRR32B1ATL7 298 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 FAM25AB3EWG3 89 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 FAM25CB3EWG5 89 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 FAM25GB3EWG6 89 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 BGLAPP02818 100 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 SLC2A2P11168 524 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-205ENST00000464187 EDNRAP25101 427 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 PSMB10P40306 273 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 HSF2Q03933 536 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 MESTQ5EB52 335 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 ABHD17BQ5VST6 288 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 RPL22L1Q6P5R6 122 aaKnown RBP13.06□□□□□ -0.32
COL5A1-205ENST00000464187 ARSKQ6UWY0 536 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 GRINAQ7Z429 371 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 TMEM234Q8WY98 164 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 UBL7Q96S82 380 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-205ENST00000464187 TTYH2Q9BSA4 534 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 MMP28Q9H239 520 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 PROK2Q9HC23 129 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 FBXL2Q9UKC9 423 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 RASD1Q9Y272 281 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 VDAC3Q9Y277 283 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 F10P00742 488 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 SERPINA3P01011 423 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 CD1AP06126 327 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 EIF4EP06730 217 aaKnown RBP13.05□□□□□ -0.32
COL5A1-205ENST00000464187 PRKCAP17252 672 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 CXCR1P25024 350 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 GRPRP30550 384 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 POLR2HP52434 150 aaKnown RBP13.05□□□□□ -0.32
COL5A1-205ENST00000464187 RRADP55042 308 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 RPS11P62280 158 aaKnown RBP eCLIP13.05□□□□□ -0.32
COL5A1-205ENST00000464187 OC90Q02509 493 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-205ENST00000464187 SLC25A35Q3KQZ1 300 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 TRIQKQ629K1 86 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 GALNT16Q8N428 558 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 ZNF511Q8NB15 262 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 RPS4Y2Q8TD47 263 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 ST8SIA1Q92185 356 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 MRPL48Q96GC5 212 aaKnown RBP13.05□□□□□ -0.32
COL5A1-205ENST00000464187 NPAP1Q9NZP6 1156 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 EXTL2Q9UBQ6 330 aa13.05□□□□□ -0.32
COL5A1-205ENST00000464187 TRAV36DV7A0A075B6V5 113 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 G3V3Y1 287 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 H7C1C5 153 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 LCN6P62502 163 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 EMC4Q5J8M3 183 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 ZNF684Q5T5D7 378 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 C1QL3Q5VWW1 255 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 PAMR1Q6UXH9 720 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 ZNF227Q86WZ6 799 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 LRRC28Q86X40 367 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-205ENST00000464187 ADGRG3Q86Y34 549 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 PLCZ1Q86YW0 608 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 RDH10Q8IZV5 341 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 FADS6Q8N9I5 356 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 OR2M3Q8NG83 312 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 OR4K17Q8NGC6 315 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 NTNG2Q96CW9 530 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 DNAJA3Q96EY1 480 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 NPAS1Q99742 590 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 CYSLTR2Q9NS75 346 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 LRFN1Q9P244 771 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 ABI3Q9P2A4 366 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 GRHPRQ9UBQ7 328 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 KLHDC2Q9Y2U9 406 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 LAMA5O15230 3695 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 TMED7-TICAM2A0A0A6YYA0 188 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 TRBV2A0A0J9YWF9 115 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 A0A1W2PPK0 400 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 DCTN6O00399 190 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 P04436 131 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 HIST1H2ABP04908 130 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 RAB3BP20337 219 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 KIR2DL3P43628 341 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 HTR3AP46098 478 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 ZNF41P51814 821 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-205ENST00000464187 CCDC58Q4VC31 144 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 ZNF544Q6NX49 715 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 LINC00696Q6ZRV3 163 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 TRILQ7L0X0 811 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 HIST3H2AQ7L7L0 130 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 SLC16A9Q7RTY1 509 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 TIGD4Q8IY51 512 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 SAMD12Q8N8I0 201 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 OR4M1Q8NGD0 313 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 TRMT10AQ8TBZ6 339 aaKnown RBP13.04□□□□□ -0.32
COL5A1-205ENST00000464187 HIST1H2ACQ93077 130 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 RNF166Q96A37 237 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-205ENST00000464187 PDCD1LG2Q9BQ51 273 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms