RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 DYSFO75923 2080 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 PKD1L1Q8TDX9 2849 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 IGLV3-9A0A075B6K5 115 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 SLC22A23A1A5C7 686 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 DHHO43323 396 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 ZNF500O60304 480 aaPredicted RBP19.31■□□□□ 0.68
USP4-208ENST00000464168 CDC14BO60729 498 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 LYPD3O95274 346 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 IDH3AP50213 366 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 NPTX1Q15818 432 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 ZNF74Q16587 644 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 DUSP7Q16829 419 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 USP43Q70EL4 1123 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 LRRC17Q8N6Y2 441 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 SYNPRQ8TBG9 265 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 ZNF566Q969W8 418 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 TLCD1Q96CP7 247 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 SLC25A44Q96H78 314 aaPredicted RBP19.31■□□□□ 0.68
USP4-208ENST00000464168 ARHGDIGQ99819 225 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 GPR160Q9UJ42 338 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 PCDHB10Q9UN67 800 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 CORO2BQ9UQ03 480 aa19.31■□□□□ 0.68
USP4-208ENST00000464168 WNK2Q9Y3S1 2297 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 LOC105371242A0A075B767 164 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 EVPLLA8MZ36 301 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 POLR3GO15318 223 aaPredicted RBP19.3■□□□□ 0.68
USP4-208ENST00000464168 SPRY1O43609 319 aaPredicted RBP19.3■□□□□ 0.68
USP4-208ENST00000464168 CHP2O43745 196 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 ENTPD5O75356 428 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 TGDSO95455 350 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 CH25HO95992 272 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 PNPP00491 289 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 THY1P04216 161 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 KLF3P57682 345 aaPredicted RBP19.3■□□□□ 0.68
USP4-208ENST00000464168 PCBP3P57721 371 aaKnown RBP19.3■□□□□ 0.68
USP4-208ENST00000464168 SELENOVP59797 346 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 HILS1P60008 231 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 ERVS71-1P61550 626 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 ACTG1P63261 375 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 ACSM5Q6NUN0 579 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 TMEM154Q6P9G4 183 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 DLEU7Q6UYE1 221 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 GPR32P1Q8NGA4 272 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 OR4K5Q8NGD3 323 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 OR6T1Q8NGN1 323 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 FAM216AQ8WUB2 273 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 EBF4Q9BQW3 602 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 CPPED1Q9BRF8 314 aaPredicted RBP19.3■□□□□ 0.68
USP4-208ENST00000464168 OR51B6Q9H340 312 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 ZNF665Q9H7R5 613 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 NKIRAS2Q9NYR9 191 aa19.3■□□□□ 0.68
USP4-208ENST00000464168 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.3■□□□□ 0.68
USP4-208ENST00000464168 TMEM89A2RUT3 159 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 RNF13O43567 381 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 FARS2O95363 451 aaKnown RBP19.29■□□□□ 0.68
USP4-208ENST00000464168 QDPRP09417 244 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 PGA4P0DJD7 388 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 PGA3P0DJD8 388 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 ANPEPP15144 967 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 EPHA1P21709 976 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 MVKQ03426 396 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 RBBP4Q09028 425 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 MELKQ14680 651 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 PCGF3Q3KNV8 242 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 MMEL1Q495T6 779 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 ENTPD8Q5MY95 495 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 AVPI1Q5T686 147 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 TMEM53Q6P2H8 277 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 PEG10Q86TG7 708 aaKnown RBP19.29■□□□□ 0.68
USP4-208ENST00000464168 PTOV1Q86YD1 416 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 ZNF519Q8TB69 540 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 C11orf40Q8WZ69 217 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 GCDHQ92947 438 aaPredicted RBP19.29■□□□□ 0.68
USP4-208ENST00000464168 C7orf26Q96N11 449 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 RNF121Q9H920 327 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 CDH20Q9HBT6 801 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 NANSQ9NR45 359 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 SLCO1C1Q9NYB5 712 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 ANGPT4Q9Y264 503 aa19.29■□□□□ 0.68
USP4-208ENST00000464168 CPSF4LA6NMK7 179 aaKnown RBP19.28■□□□□ 0.68
USP4-208ENST00000464168 M0QX08 132 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 WIPF1O43516 503 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 PLPP2O43688 288 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 DEAF1O75398 565 aaPredicted RBP19.28■□□□□ 0.68
USP4-208ENST00000464168 MPZL1O95297 269 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 SNAP29O95721 258 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 LCKP06239 509 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 EGR1P18146 543 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 CRYBB2P43320 205 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 ARFIP2P53365 341 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 UCP2P55851 309 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 AGKQ53H12 422 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 RUNDC3AQ59EK9 446 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 DPPA2Q7Z7J5 298 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 TSPYL5Q86VY4 417 aaPredicted RBP19.28■□□□□ 0.68
USP4-208ENST00000464168 RBM45Q8IUH3 476 aaKnown RBP19.28■□□□□ 0.68
USP4-208ENST00000464168 OR4D11Q8NGI4 311 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 CCDC28BQ9BUN5 200 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 TMPRSS13Q9BYE2 586 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 C1orf198Q9H425 327 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms