RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 HBMQ6B0K9 141 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 SPATC1Q76KD6 591 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 CADM3Q8N126 398 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 SCAIQ8N9R8 606 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 MINDY2Q8NBR6 621 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 OTOSQ8NHW6 89 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 KLHL15Q96M94 604 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 SOSTQ9BQB4 213 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 STRADBQ9C0K7 418 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 SH2D2AQ9NP31 389 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 NOX4Q9NPH5 578 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 MED12Q93074 2177 aa11.49□□□□□ -0.57
VAPB-203ENST00000463370 CACNA1HO95180 2353 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 A0A1B0GVC2 190 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 A0A1W2PQ72 361 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 A6NIN4 97 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 BOLA2-SMG1P6H3BVE0 249 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 UCHL1P09936 223 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 EVX1P49640 407 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 P2RY4P51582 365 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 OPN5Q6U736 354 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 LRRN1Q6UXK5 716 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 PLCZ1Q86YW0 608 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 RDH10Q8IZV5 341 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 TEX19Q8NA77 164 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 SLC39A7Q92504 469 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 OR5B2Q96R09 309 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 TAAR9Q96RI9 348 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 NEURL2Q9BR09 285 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 EDEM2Q9BV94 578 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 POTEKPQ9BYX7 375 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 PPP1R3EQ9H7J1 279 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 SP140LQ9H930 580 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 SERINC1Q9NRX5 453 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 ALKBH4Q9NXW9 302 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 A0A0G2JMM0 328 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 A0A1W2PPB8 328 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 A0A1W2PRS3 328 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 ANKRD61A6NGH8 418 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 KIR3DP1A8MWS1 328 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 NPIPA5E9PKD4 350 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 TMCC2O75069 709 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 TRIM3O75382 744 aaPredicted RBP11.48□□□□□ -0.57
VAPB-203ENST00000463370 ODF4Q2M2E3 257 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 PYDC2Q56P42 97 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 CDCP2Q5VXM1 449 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 C3orf33Q6P1S2 294 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 XKRXQ6PP77 449 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 DHRS13Q6UX07 377 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 UNQ9370/PRO34162Q6UXP9 181 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 NHLRC1Q6VVB1 395 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 PRSS35Q8N3Z0 413 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 TMEM156Q8N614 296 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 ZNF248Q8NDW4 579 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 OR10AC1Q8NH08 325 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 PAQR8Q8TEZ7 354 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 JSRP1Q96MG2 331 aaPredicted RBP11.48□□□□□ -0.57
VAPB-203ENST00000463370 SNX18Q96RF0 628 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 KCNK17Q96T54 332 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 SLC25A18Q9H1K4 315 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 NPIPA1Q9UND3 350 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 ZNF281Q9Y2X9 895 aa11.48□□□□□ -0.57
VAPB-203ENST00000463370 AK6Q9Y3D8 172 aaKnown RBP11.48□□□□□ -0.57
VAPB-203ENST00000463370 ANKRD33BA6NCL7 494 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 PTTG1O95997 202 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 SERPINA3P01011 423 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 KRT8P05787 483 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 CD1AP06126 327 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 EIF4EP06730 217 aaKnown RBP11.47□□□□□ -0.57
VAPB-203ENST00000463370 SPARCP09486 303 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 RAB3BP20337 219 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 ADAM8P78325 824 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 CDC20Q12834 499 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 SNTA1Q13424 505 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 ALKBH1Q13686 389 aaKnown RBP11.47□□□□□ -0.57
VAPB-203ENST00000463370 MFSD13AQ14CX5 517 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 TMEM176BQ3YBM2 270 aaPredicted RBP11.47□□□□□ -0.57
VAPB-203ENST00000463370 FAM220AQ7Z4H9 259 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 OR51A4Q8NGJ6 313 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 PPP1R14AQ96A00 147 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 MRPL48Q96GC5 212 aaKnown RBP11.47□□□□□ -0.57
VAPB-203ENST00000463370 GFI1Q99684 422 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 ANGPTL4Q9BY76 406 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 FARSAQ9Y285 508 aaKnown RBP11.47□□□□□ -0.57
VAPB-203ENST00000463370 DMXL1Q9Y485 3027 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 TRAV1-2A0A0B4J238 106 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 ZNF806P0C7X5 589 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 ATF1P18846 271 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 RFX2P48378 723 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 BIDP55957 195 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 SPEM2Q0P670 501 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 NRARPQ7Z6K4 114 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 ZNF554Q86TJ5 538 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 TPRA1Q86W33 373 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 CELF2-AS1Q8N7Q2 184 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 OR5H6Q8NGV6 325 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 NTNG2Q96CW9 530 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 NEDD4LQ96PU5 975 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 PTGES2Q9H7Z7 377 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 HPF1Q9NWY4 346 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms