RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 OR2G3Q8NGZ4 309 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 MCOLN3Q8TDD5 553 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 SGK3Q96BR1 496 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 ATP5SQ99766 215 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 ILKAPQ9H0C8 392 aaPredicted RBP3.71□□□□□ -1.82
CCDC50-203ENST00000460064 PACSIN2Q9UNF0 486 aaPredicted RBP3.71□□□□□ -1.82
CCDC50-203ENST00000460064 NEU3Q9UQ49 428 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 VGLL3A8MV65 326 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 H3BNH8 94 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 PANO1I0J062 215 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 DLGAP1O14490 977 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 CACNG3O60359 315 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 DFNA5O60443 496 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 AGTP01019 485 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 S100A9P06702 114 aaKnown RBP3.7□□□□□ -1.82
CCDC50-203ENST00000460064 CSF3P09919 207 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 CCDC172P0C7W6 258 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 CRISP2P16562 243 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 ZNF17P17021 662 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 ACLYP53396 1101 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 RFX4Q33E94 735 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 FBXO48Q5FWF7 155 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 PRAMEF20Q5VT98 475 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 SLC8B1Q6J4K2 584 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 LIX1Q8N485 282 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 MS4A15Q8N5U1 240 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 Q8N7P7 452 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 OR6X1Q8NH79 312 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 PIBF1Q8WXW3 757 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 CCDC126Q96EE4 140 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 TSNARE1Q96NA8 513 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 OR2M2Q96R28 347 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 RAB20Q9NX57 234 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 DEC1Q9P2X7 70 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 USP47Q96K76 1375 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 LTBP1Q14766 1721 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 MEGF6O75095 1541 aa3.7□□□□□ -1.82
CCDC50-203ENST00000460064 IGKV1D-13A0A0B4J2D9 117 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 A6NDX4 124 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 CETN3O15182 167 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 CLOCKO15516 846 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 EIF3GO75821 320 aaKnown RBP eCLIP3.69□□□□□ -1.82
CCDC50-203ENST00000460064 CLIC3O95833 236 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 FTH1P02794 183 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 TPM3P06753 285 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 IGKV1-13P0DP09 117 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 RCC1P18754 421 aaPredicted RBP3.69□□□□□ -1.82
CCDC50-203ENST00000460064 RORCP51449 518 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 PRRX1P54821 245 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 KRTAP10-3P60369 221 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 TGM3Q08188 693 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 ECH1Q13011 328 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 ZBED5Q49AG3 693 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 AP1ARQ63HQ0 302 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 SASS6Q6UVJ0 657 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 ZNF621Q6ZSS3 439 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 COX15Q7KZN9 410 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 TMEM135Q86UB9 458 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 EID2Q8N6I1 236 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 ZNF321PQ8N8H1 164 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 Q8N9W7 124 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 HSD17B11Q8NBQ5 300 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 NPBQ8NG41 125 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 OR7G2Q8NG99 324 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 OR1S2Q8NGQ3 325 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 LILRB4Q8NHJ6 448 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 RHEBL1Q8TAI7 183 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 DTX3LQ8TDB6 740 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 CXorf40AQ8TE69 158 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 GEMIN6Q8WXD5 167 aaKnown RBP3.69□□□□□ -1.82
CCDC50-203ENST00000460064 KIFAP3Q92845 792 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 C8orf76Q96K31 380 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 ECSITQ9BQ95 431 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 XKR8Q9H6D3 395 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 NEK6Q9HC98 313 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 NYAP2Q9P242 653 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 PITPNC1Q9UKF7 332 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 TRAPPC4Q9Y296 219 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 TP53TG5Q9Y2B4 290 aa3.69□□□□□ -1.82
CCDC50-203ENST00000460064 TNIKQ9UKE5 1360 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 SERTM2A0A1B0GWG4 89 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 WI2-2373I1.2A0A1W2PRP0 233 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 SMCO2A6NFE2 343 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 LRRIQ3A6PVS8 624 aaPredicted RBP3.68□□□□□ -1.82
CCDC50-203ENST00000460064 C9JVG2 144 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 AIM2O14862 343 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 CASC3O15234 703 aaKnown RBP3.68□□□□□ -1.82
CCDC50-203ENST00000460064 FLOT1O75955 427 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 ANXA5P08758 320 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 PNMA6AP0CW24 399 aaPredicted RBP3.68□□□□□ -1.82
CCDC50-203ENST00000460064 NR2C1P13056 603 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 ZNF43P17038 809 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 CCNHP51946 323 aaPredicted RBP3.68□□□□□ -1.82
CCDC50-203ENST00000460064 ZNF133P52736 654 aaPredicted RBP3.68□□□□□ -1.82
CCDC50-203ENST00000460064 CARD18P57730 90 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 YWHAGP61981 247 aaKnown RBP eCLIP3.68□□□□□ -1.82
CCDC50-203ENST00000460064 SPAG1Q07617 926 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 LRRC66Q68CR7 880 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 SPATA24Q86W54 205 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 FAM81AQ8TBF8 368 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms