RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 UGT2B15P54855 530 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 KRTAP10-11P60412 298 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 MS4A2Q01362 244 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 RNPS1Q15287 305 aaKnown RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 SF3A2Q15428 464 aaKnown RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 SYPL1Q16563 259 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 DGUOKQ16854 277 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 ATP6V1FQ16864 119 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 SLC9C1Q4G0N8 1177 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 ZNF658BQ4V348 819 aaPredicted RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 EIPR1Q53HC9 387 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 ASPRV1Q53RT3 343 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 SYT6Q5T7P8 510 aaPredicted RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 B3GNTL1Q67FW5 361 aaPredicted RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 OR4F3Q6IEY1 312 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 TYW3Q6IPR3 259 aaKnown RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 ZNF774Q6NX45 483 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 XKRXQ6PP77 449 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 Q6ZVL8 140 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 HIST3H2AQ7L7L0 130 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 LINGO2Q7L985 606 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D26Q86UD7 250 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 GPAT4Q86UL3 456 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 CARM1Q86X55 608 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 PTOV1Q86YD1 416 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 RIMKLAQ8IXN7 391 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 EMC1Q8N766 993 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 SIDT2Q8NBJ9 832 aaKnown RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 SDR9C7Q8NEX9 313 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 OR4K2Q8NGD2 314 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 OR9Q1Q8NGQ5 310 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 WDR20Q8TBZ3 569 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 GGHQ92820 318 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 TLCD1Q96CP7 247 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 C10orf35Q96D05 121 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 ZHX1-C8orf76Q96EF9 292 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 MED8Q96G25 268 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 OR5B12Q96R08 314 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 SDHCQ99643 169 aaPredicted RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 ZSWIM1Q9BR11 485 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 PAAF1Q9BRP4 392 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 NEUROG2Q9H2A3 272 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 SYT4Q9H2B2 425 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 BOLA2Q9H3K6 86 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 DCLRE1BQ9H816 532 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 MIEF1Q9NQG6 463 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 ECHDC1Q9NTX5 307 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 MAT2BQ9NZL9 334 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 DNMT3BQ9UBC3 853 aaKnown RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 GNG8Q9UK08 70 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 ZNF223Q9UK11 482 aaPredicted RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 BAIAP2Q9UQB8 552 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 ANGPT4Q9Y264 503 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 WDR45Q9Y484 360 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 CDY1Q9Y6F8 540 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 V9GYY9 64 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 ZNF609O15014 1411 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 SNED1Q8TER0 1413 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 KDM3BQ7LBC6 1761 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 CHD5Q8TDI0 1954 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 NAV1Q8NEY1 1877 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 A0A1W2PP64 1363 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 FLT4P35916 1363 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 MROH7Q68CQ1 1323 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 A0A1W2PR80 420 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 A0A1W2PRD5 423 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 MANSC4A6NHS7 340 aaPredicted RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 C5orf58C9J3I9 102 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 M0QYG6 137 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 SIGLEC5O15389 551 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 CHST10O43529 356 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 TPST1O60507 370 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 RAD1O60671 282 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 GGCTO75223 188 aaKnown RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 KRT33AO76009 404 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 PAPSS2O95340 614 aaPredicted RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 FARS2O95363 451 aaKnown RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 MT-CO2P00403 227 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 GOT2P00505 430 aaKnown RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 EGFP01133 1207 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ORM1P02763 201 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ATP1A1P05023 1023 aaKnown RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 TSPAN19P0C672 248 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 MYL2P10916 166 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ATP1B2P14415 290 aaPredicted RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 NELFEP18615 380 aaKnown RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 FUT3P21217 361 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 FPR3P25089 353 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 FMO3P31513 532 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 FOXN2P32314 431 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 LIPAP38571 399 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 TNFRSF4P43489 277 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ASCL1P50553 236 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 HMGCS2P54868 508 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 NXPH1P58417 271 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 DNAJB13P59910 316 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 RPL15P61313 204 aaKnown RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 BTN3A2P78410 334 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 SLC7A9P82251 487 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms