RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 TMED4Q7Z7H5 227 aa14.28□□□□□ -0.12
TRA2B-205ENST00000453386 CDH26Q8IXH8 852 aa14.28□□□□□ -0.12
TRA2B-205ENST00000453386 C16orf52Q8NHV5 167 aa14.28□□□□□ -0.12
TRA2B-205ENST00000453386 APMAPQ9HDC9 416 aa14.28□□□□□ -0.12
TRA2B-205ENST00000453386 HIF3AQ9Y2N7 669 aa14.28□□□□□ -0.12
TRA2B-205ENST00000453386 TMEM212A6NML5 194 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 TOR1AO14656 332 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 ZNF254O75437 659 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 RLN2P04090 185 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 CALCRP30988 508 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 CENPAP49450 140 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 C2orf76Q3KRA6 126 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 NKAIN2Q5VXU1 208 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 ZNF595Q8IYB9 648 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 PRSS35Q8N3Z0 413 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 OR5M9Q8NGP3 310 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 PHOSPHO1Q8TCT1 267 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 FBXW5Q969U6 566 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 FOXN4Q96NZ1 517 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 DGAT2Q96PD7 388 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 LPAR4Q99677 370 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 SLC19A3Q9BZV2 496 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 ATG5Q9H1Y0 275 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 CERS4Q9HA82 394 aa14.27□□□□□ -0.12
TRA2B-205ENST00000453386 TICRRQ7Z2Z1 1910 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 TRBV5-7A0A0A0MS05 114 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 D6RAR5 112 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 PRAMEF2O60811 474 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 ZNF432O94892 652 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 HLA-DQA2P01906 255 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 ITGA5P08648 1049 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 NTSR1P30989 418 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 ARHGAP40Q5TG30 622 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 STEAP1BQ6NZ63 245 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 TFAP2EQ6VUC0 442 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 PARGQ86W56 976 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 OOSP2Q86WS3 158 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 EXD3Q8N9H8 876 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 STK35Q8TDR2 534 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 ELF4Q99607 663 aaPredicted RBP14.27□□□□□ -0.13
TRA2B-205ENST00000453386 SYT4Q9H2B2 425 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 POFUT1Q9H488 388 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 EXOSC3Q9NQT5 275 aaKnown RBP14.27□□□□□ -0.13
TRA2B-205ENST00000453386 GLS2Q9UI32 602 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 RWDD3Q9Y3V2 267 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 MPDZO75970 2070 aa14.27□□□□□ -0.13
TRA2B-205ENST00000453386 IFI6P09912 130 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 ALOX5APP20292 161 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 COL9A1P20849 921 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 FNTBP49356 437 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 RPL18Q07020 188 aaKnown RBP14.26□□□□□ -0.13
TRA2B-205ENST00000453386 UBXN2BQ14CS0 331 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 ALG11Q2TAA5 492 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 WBP2NLQ6ICG8 309 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 CBLN3Q6UW01 205 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 FAM3DQ96BQ1 224 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 RPP25Q9BUL9 199 aaKnown RBP14.26□□□□□ -0.13
TRA2B-205ENST00000453386 MMP25Q9NPA2 562 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 ARID1BQ8NFD5 2236 aaPredicted RBP14.26□□□□□ -0.13
TRA2B-205ENST00000453386 OIP5O43482 229 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 FOXS1O43638 330 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 RAB11BQ15907 218 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 TMEM240Q5SV17 173 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 POMZP3Q6PJE2 187 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 SLC35D2Q76EJ3 337 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 HSD17B13Q7Z5P4 300 aaPredicted RBP14.26□□□□□ -0.13
TRA2B-205ENST00000453386 BIVMQ86UB2 503 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 PLPP7Q8NBV4 271 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 INTS14Q96SY0 518 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 AMELYQ99218 206 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 OR10A5Q9H207 317 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 LDAHQ9H6V9 325 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 SFXN1Q9H9B4 322 aa14.26□□□□□ -0.13
TRA2B-205ENST00000453386 SIGLEC5O15389 551 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 APBB3O95704 486 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 PNMTP11086 282 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 HOXB2P14652 356 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 CSRP1P21291 193 aaKnown RBP14.25□□□□□ -0.13
TRA2B-205ENST00000453386 MAOAP21397 527 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 SIGLEC14Q08ET2 396 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 RASGEF1BQ0VAM2 473 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 CD226Q15762 336 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 MESTQ5EB52 335 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 ZNF542PQ5EBM4 170 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 LRRC75AQ8NAA5 344 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 ATOH1Q92858 354 aaPredicted RBP14.25□□□□□ -0.13
TRA2B-205ENST00000453386 KTI12Q96EK9 354 aaPredicted RBP14.25□□□□□ -0.13
TRA2B-205ENST00000453386 TSPAN32Q96QS1 320 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 B3GNT4Q9C0J1 378 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 IGFLR1Q9H665 355 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 KCNG2Q9UJ96 466 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 CDC40O60508 579 aaKnown RBP eCLIP14.25□□□□□ -0.131e-8■■■■■ 31.8
TRA2B-205ENST00000453386 TPPPO94811 219 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 RENP00797 406 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 RNH1P13489 461 aaKnown RBP14.25□□□□□ -0.13
TRA2B-205ENST00000453386 ST6GAL1P15907 406 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 CSF2RBP32927 897 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 WDR38Q5JTN6 314 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 ZNF627Q7L945 461 aa14.25□□□□□ -0.13
TRA2B-205ENST00000453386 ATG4DQ86TL0 474 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms