RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ALKBH1Q13686 389 aaKnown RBP11.91□□□□□ -0.5
DDX56-206ENST00000446987 FRG2Q64ET8 278 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 ACSM5Q6NUN0 579 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 C1orf94Q6P1W5 598 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 C1QL4Q86Z23 238 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 BRIX1Q8TDN6 353 aaKnown RBP11.91□□□□□ -0.5
DDX56-206ENST00000446987 LCN9Q8WX39 176 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 HIST1H2BAQ96A08 127 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 TGM7Q96PF1 710 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 FRG2BQ96QU4 278 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 KLHL31Q9H511 634 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 SIDT1Q9NXL6 827 aaKnown RBP11.91□□□□□ -0.5
DDX56-206ENST00000446987 ZFHX4Q86UP3 3567 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 PLPP2O43688 288 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 CRYABP02511 175 aaKnown RBP11.9□□□□□ -0.5
DDX56-206ENST00000446987 IL3P08700 152 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 ANXA5P08758 320 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 EPXP11678 715 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 PAX1P15863 534 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 CBR1P16152 277 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 SHC1P29353 583 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 GDF5P43026 501 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 PNLIPRP2P54317 469 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 FOXO1Q12778 655 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 RTP5Q14D33 572 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 PHF19Q5T6S3 580 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 TMEM244Q5VVB8 128 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 ANGPTL8Q6UXH0 198 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 B3GLCTQ6Y288 498 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 LNX2Q8N448 690 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 OR6X1Q8NH79 312 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 CHMP1AQ9HD42 196 aaPredicted RBP11.9□□□□□ -0.5
DDX56-206ENST00000446987 DUSP22Q9NRW4 184 aa11.9□□□□□ -0.5
DDX56-206ENST00000446987 IGHV5-51A0A0C4DH38 117 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 A0A1W2PPV9 198 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 PRICKLE3O43900 615 aaPredicted RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 SLC25A12O75746 678 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 RBBP9O75884 186 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 GUCA1CO95843 209 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 NDUFB7P17568 137 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 HTR1FP30939 366 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 CDH11P55287 796 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 TRA2AQ13595 282 aaKnown RBP eCLIP11.89□□□□□ -0.51
DDX56-206ENST00000446987 ZXDCQ2QGD7 858 aaPredicted RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 AADACL4Q5VUY2 407 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 TCTN3Q6NUS6 607 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 LPCAT3Q6P1A2 487 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 APOOLQ6UXV4 268 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 ZNF546Q86UE3 836 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 TMEM200AQ86VY9 491 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 OOSP2Q86WS3 158 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 CCDC116Q8IYX3 515 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 IQCF1Q8N6M8 205 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 STOML3Q8TAV4 291 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 SKA2Q8WVK7 121 aaPredicted RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 MAP3K3Q99759 626 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 MRI1Q9BV20 369 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 SRMSQ9H3Y6 488 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 UNKLQ9H9P5 680 aaKnown RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 ACKR4Q9NPB9 350 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 ASCL3Q9NQ33 180 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 TRIM36Q9NQ86 728 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 INPP5EQ9NRR6 644 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 UQCC1Q9NVA1 299 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 HRASLS2Q9NWW9 162 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 TMEM184BQ9Y519 407 aaPredicted RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 CFAP47Q6ZTR5 3102 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 SDK2Q58EX2 2172 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 CCDC187A0A096LP49 1063 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 C1QTNF9BB2RNN3 333 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 J3QRE1 110 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 CLDN4O14493 209 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 NME6O75414 186 aaPredicted RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 C1QTNF9P0C862 333 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 COX5BP10606 129 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 CCL4P13236 92 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 HIST1H1BP16401 226 aaKnown RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 PPT1P50897 306 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 RAB28P51157 221 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 ACY1Q03154 408 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 INSL4Q14641 139 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 MELKQ14680 651 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 HMGN3Q15651 99 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 COX20Q5RI15 118 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 REEP3Q6NUK4 255 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 MBOAT1Q6ZNC8 495 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 MAMDC2Q7Z304 686 aaPredicted RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 PLXDC1Q8IUK5 500 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 OR5M1Q8NGP8 315 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 PMM1Q92871 262 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 PKP4Q99569 1192 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 SLC35A5Q9BS91 424 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 ADAT1Q9BUB4 502 aaKnown RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 TEX12Q9BXU0 123 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 NRSN2Q9GZP1 204 aa11.89□□□□□ -0.51
DDX56-206ENST00000446987 TSPAN10Q9H1Z9 355 aaPredicted RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 CCDC86Q9H6F5 360 aaKnown RBP11.89□□□□□ -0.51
DDX56-206ENST00000446987 SEC61A2Q9H9S3 476 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms