RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MOGQ16653 247 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 PDCD4Q53EL6 469 aaKnown RBP12.18□□□□□ -0.46
HMGN1-208ENST00000443046 TMEM255AQ5JRV8 349 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 FAM91A1Q658Y4 838 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 ULK3Q6PHR2 472 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 LRFN4Q6PJG9 635 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 COMTD1Q86VU5 262 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 SLC25A28Q96A46 364 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 ELMOD3Q96FG2 381 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 SH3GL3Q99963 347 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 GAL3ST1Q99999 423 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 BCL2L14Q9BZR8 327 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 C1orf198Q9H425 327 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 TMEM38BQ9NVV0 291 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 GLTPQ9NZD2 209 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 RPS6KB2Q9UBS0 482 aa12.18□□□□□ -0.46
HMGN1-208ENST00000443046 TM9SF1O15321 606 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 FOXH1O75593 365 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 IGHV1-46P01743 117 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 LCKP06239 509 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 ADH4P08319 380 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 ZNF12P17014 697 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 MDKP21741 143 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-208ENST00000443046 PRKAR1BP31321 381 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 CSNK1A1P48729 337 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 PMS2P3Q13401 168 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 TSTQ16762 297 aaKnown RBP12.17□□□□□ -0.46
HMGN1-208ENST00000443046 ARMCX4Q5H9R4 360 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 ALG10BQ5I7T1 473 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 LEG1Q6P5S2 330 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 C9orf139Q6ZV77 190 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 DPPA2Q7Z7J5 298 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 MIER2Q8N344 545 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 GLB1L3Q8NCI6 653 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-208ENST00000443046 OR6X1Q8NH79 312 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 CCL17Q92583 94 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 VPS33AQ96AX1 596 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 TRIM44Q96DX7 344 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-208ENST00000443046 PKNOX2Q96KN3 472 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 ASPNQ9BXN1 380 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 OR51B6Q9H340 312 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 CDH20Q9HBT6 801 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 AUP1Q9Y679 476 aa12.17□□□□□ -0.46
HMGN1-208ENST00000443046 A0A0B4J2E0 115 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 A0A1B0GX12 115 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 SDHDO14521 159 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 BIRC5O15392 142 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 TPD52L2O43399 206 aaKnown RBP12.16□□□□□ -0.46
HMGN1-208ENST00000443046 ENTPD5O75356 428 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 IGHMP01871 453 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 MT-ND5P03915 603 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 IL6P05231 212 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 NUDT7P0C024 238 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 BMP2P12643 396 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 ZNF81P51508 661 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 BIDP55957 195 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 SLC3A1Q07837 685 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 TBC1D28Q2M2D7 210 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 GTDC1Q4AE62 458 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 BHLHE22Q8NFJ8 381 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-208ENST00000443046 TMIGD2Q96BF3 282 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 SLC47A1Q96FL8 570 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 EPYCQ99645 322 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 CACYBPQ9HB71 228 aaKnown RBP12.16□□□□□ -0.46
HMGN1-208ENST00000443046 A4GALTQ9NPC4 353 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 PDP1Q9P0J1 537 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-208ENST00000443046 INSIG2Q9Y5U4 225 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 RYR3Q15413 4870 aa12.16□□□□□ -0.46
HMGN1-208ENST00000443046 LRRN3E7EW58 273 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 DHHO43323 396 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 TPST2O60704 377 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 IGHV2-70P01814 119 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 MMP7P09237 267 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-208ENST00000443046 ETS2P15036 469 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 AHCYP23526 432 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 SLC1A6P48664 564 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 GLO1Q04760 184 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 RGNQ15493 299 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 NRN1LQ496H8 165 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 TMEM53Q6P2H8 277 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 DHRS4L2Q6PKH6 230 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 LINC00114Q6XXX2 140 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 KIRREL3Q8IZU9 778 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 OR1J2Q8NGS2 313 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 BBS10Q8TAM1 723 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 ST7LQ8TDW4 575 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 MAL2Q969L2 176 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 MARS2Q96GW9 593 aaKnown RBP12.15□□□□□ -0.46
HMGN1-208ENST00000443046 TMEM43Q9BTV4 400 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 NPHS2Q9NP85 383 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 PNPOQ9NVS9 261 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 UBAP1Q9NZ09 502 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 KLHL21Q9UJP4 597 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 NPTNQ9Y639 398 aa12.15□□□□□ -0.46
HMGN1-208ENST00000443046 WDR91A4D1P6 747 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 TMEM247A6NEH6 219 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 A8MXK9 166 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 TPST1O60507 370 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 FARS2O95363 451 aaKnown RBP12.14□□□□□ -0.47
HMGN1-208ENST00000443046 MT-ATP6P00846 226 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms