RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 RPS23P62266 143 aaKnown RBP17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 GGTLC2Q14390 218 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 TMEM249Q2WGJ8 235 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 SYT14Q8NB59 555 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 FAM162AQ96A26 154 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 TNFRSF13CQ96RJ3 184 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 FNDC11Q9BVV2 318 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 NSRP1Q9H0G5 558 aaKnown RBP17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 RTTNQ86VV8 2226 aa17.18■□□□□ 0.34
SHROOM1-204ENST00000440118 CXCR6O00574 342 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 NDUFAB1O14561 156 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 GPRIN2O60269 458 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 PIP5K1CO60331 668 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 SAGP10523 405 aaPredicted RBP17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 IFI30P13284 250 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 ZNF14P17017 642 aaPredicted RBP17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 USF1P22415 310 aaPredicted RBP17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 YAP1P46937 504 aaKnown RBP17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 MYBPC1Q00872 1141 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 GABPB1Q06547 395 aaPredicted RBP17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 LOXL1Q08397 574 aaPredicted RBP17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 TOP3AQ13472 1001 aaPredicted RBP17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 RAB39AQ14964 217 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 SLC36A2Q495M3 483 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 IQCCQ4KMZ1 466 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 TMEM53Q6P2H8 277 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 FKBP9P1Q75LS8 142 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 VTCN1Q7Z7D3 282 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 SKA3Q8IX90 412 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 SLC15A3Q8IY34 581 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 OR4K5Q8NGD3 323 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 GEMIN6Q8WXD5 167 aaKnown RBP17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 ASB10Q8WXI3 467 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 ZNF347Q96SE7 839 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 SH3GL3Q99963 347 aa17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 HOPXQ9BPY8 73 aaPredicted RBP17.17■□□□□ 0.34
SHROOM1-204ENST00000440118 A8MV72 311 aaPredicted RBP17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 NDUFS8O00217 210 aa17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 CRLF1O75462 422 aa17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 IGF2P01344 180 aa17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 PATE4P0C8F1 98 aa17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 NR2C1P13056 603 aa17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 NR4A1P22736 598 aa17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 CD47Q08722 323 aa17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 IFI44LQ53G44 452 aa17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 SLC16A14Q7RTX9 510 aa17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 KCTD14Q9BQ13 255 aaPredicted RBP17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 ELAC2Q9BQ52 826 aaKnown RBP17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 RHCGQ9UBD6 479 aa17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 YLPM1P49750 1951 aaKnown RBP17.16■□□□□ 0.34
SHROOM1-204ENST00000440118 LOC390937A0A1W2PQ73 354 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 NME4O00746 187 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 ACADSP16219 412 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 TRAM2Q15035 370 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 ALG10Q5BKT4 473 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 LRFN4Q6PJG9 635 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 DPPA2Q7Z7J5 298 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 CYP4Z1Q86W10 505 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 CDK20Q8IZL9 346 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 OFCC1Q8IZS5 231 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 MOSPD2Q8NHP6 518 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 NEU4Q8WWR8 484 aaPredicted RBP17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 MCHR2Q969V1 340 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 BPIFA2Q96DR5 249 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 CMTM5Q96DZ9 223 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 HSH2DQ96JZ2 352 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 KCNN2Q9H2S1 579 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 CDH20Q9HBT6 801 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 ZNF224Q9NZL3 707 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 GMPR2Q9P2T1 348 aaKnown RBP17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 SLC7A8Q9UHI5 535 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 A4GNTQ9UNA3 340 aa17.15■□□□□ 0.34
SHROOM1-204ENST00000440118 A0A1W2PPW3 197 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 GMNCA6NCL1 334 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 CENPBD1B2RD01 187 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 M0R233 179 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 GMNNO75496 209 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 TRMUO75648 421 aaKnown RBP17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 SERPINA1P01009 418 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 GSK3BP49841 420 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 VLDLRP98155 873 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 PLP2Q04941 152 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 RUNX1T1Q06455 604 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 C6orf52Q5T4I8 152 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 ZNF730Q6ZMV8 503 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 PRIMA1Q86XR5 153 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 NRMQ8IXM6 262 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 LRRC18Q8N456 261 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 ZNF540Q8NDQ6 660 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 RBM15BQ8NDT2 890 aaKnown RBP17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 SLC30A7Q8NEW0 376 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 MRPL24Q96A35 216 aaKnown RBP17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 SYT3Q9BQG1 590 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 LRMDAQ9H2I8 198 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 TPK1Q9H3S4 243 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 C1orf198Q9H425 327 aa17.14■□□□□ 0.33
SHROOM1-204ENST00000440118 A0A096LNT2 108 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 IQCMA0A1B0GVH7 501 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 HTR3EA5X5Y0 456 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 SERPINA5P05154 406 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms