RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 FGD2Q7Z6J4 655 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 OR52H1Q8NGJ2 320 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 SMPDL3BQ92485 455 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 HIST1H2ACQ93077 130 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 ZNF524Q96C55 264 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 ZFP3Q96NJ6 502 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 DDOQ99489 341 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 CRB3Q9BUF7 120 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 SLC19A3Q9BZV2 496 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 EXOSC3Q9NQT5 275 aaKnown RBP12.83□□□□□ -0.36
LIMD1-202ENST00000440097 CHRNA9Q9UGM1 479 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 SPATA2Q9UM82 520 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 MRPS7Q9Y2R9 242 aaKnown RBP12.83□□□□□ -0.36
LIMD1-202ENST00000440097 C2orf72A6NCS6 295 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 MFSD2BA6NFX1 497 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 OR6C76A6NM76 312 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 TSPAN2O60636 221 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 SLC6A8P48029 635 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 BLVRAP53004 296 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 PRPS1P60891 318 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 CTAG1AP78358 180 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 CCDC157Q569K6 752 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 HACD4Q5VWC8 232 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 MTFR2Q6P444 385 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 PAPD4Q6PIY7 484 aaKnown RBP12.83□□□□□ -0.36
LIMD1-202ENST00000440097 DPY19L2P2Q6ZN68 376 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 ANKRD37Q7Z713 158 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 KCTD12Q96CX2 325 aaKnown RBP12.83□□□□□ -0.36
LIMD1-202ENST00000440097 KTI12Q96EK9 354 aaPredicted RBP12.83□□□□□ -0.36
LIMD1-202ENST00000440097 LPAR4Q99677 370 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 CHIAQ9BZP6 476 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 TGIF2Q9GZN2 237 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 LAT2Q9GZY6 243 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 SHARPINQ9H0F6 387 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 NKIRAS2Q9NYR9 191 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 CDC40O60508 579 aaKnown RBP eCLIP12.82□□□□□ -0.36
LIMD1-202ENST00000440097 RGS11O94810 467 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 GALP22466 123 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 HCCSP53701 268 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 PNLIPRP2P54317 469 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 ZNF273Q14593 569 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 ZNF74Q16587 644 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 SLC25A35Q3KQZ1 300 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 HSD17B12Q53GQ0 312 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 ALG10Q5BKT4 473 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 NHLRC3Q5JS37 347 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 FAM69BQ5VUD6 431 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 ARL9Q6T311 187 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 BTN2A1Q7KYR7 527 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 DUSP19Q8WTR2 217 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 SLC25A36Q96CQ1 311 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 C4orf36Q96KX1 117 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 CXorf58Q96LI9 332 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 SFXN2Q96NB2 322 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 ADGRL4Q9HBW9 690 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 TRIM36Q9NQ86 728 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 BABAM2Q9NXR7 383 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 COPZ2Q9P299 210 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 NPTNQ9Y639 398 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 TRBV11-1A0A0K0K1C0 115 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 FAM171A2A8MVW0 826 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 ALG1L2C9J202 215 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 IMPA2O14732 288 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 MTRF1O75570 445 aaKnown RBP12.82□□□□□ -0.36
LIMD1-202ENST00000440097 GP1BBP13224 206 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 PGCP20142 388 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 SQSTM1Q13501 440 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 PON3Q15166 354 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 JAZF1Q86VZ6 243 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 MARC2Q969Z3 335 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 MMP25Q9NPA2 562 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 NPFFR2Q9Y5X5 522 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 ALPK2Q86TB3 2170 aa12.82□□□□□ -0.36
LIMD1-202ENST00000440097 TUBAL3A6NHL2 446 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 MT-ND5P03915 603 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 CTXN1P60606 82 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 SLC3A1Q07837 685 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 LEG1Q6P5S2 330 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 OVCH1Q7RTY7 1134 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 SLC43A2Q8N370 569 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 Q96M85 177 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 SMAD5Q99717 465 aaKnown RBP12.81□□□□□ -0.36
LIMD1-202ENST00000440097 TIMP4Q99727 224 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 A0A0G2JK05 382 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 TO15178 435 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 ALDOBP05062 364 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 FBXW4P57775 412 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 EGR4Q05215 589 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 LGALS3BPQ08380 585 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 CBFBQ13951 182 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 NUP210LQ5VU65 1888 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 FAM199XQ6PEV8 388 aaPredicted RBP12.81□□□□□ -0.36
LIMD1-202ENST00000440097 C3P1Q6ZMU1 363 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 UXS1Q8NBZ7 420 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 APCDD1LQ8NCL9 501 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 OIT3Q8WWZ8 545 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 AKIRIN1Q9H9L7 192 aaPredicted RBP12.81□□□□□ -0.36
LIMD1-202ENST00000440097 BRD7Q9NPI1 651 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 FLVCR2Q9UPI3 526 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 ADAMTS20P59510 1910 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms