RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MYPOPQ86VE0 399 aaPredicted RBP20.56■□□□□ 0.88
VARS-217ENST00000440048 LRRC75AQ8NAA5 344 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 SYT14Q8NB59 555 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 NOXO1Q8NFA2 376 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 OR13C2Q8NGS9 318 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 DHRS1Q96LJ7 313 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 TNFRSF13CQ96RJ3 184 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 ZNF347Q96SE7 839 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 KCNS3Q9BQ31 491 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 GRIP2Q9C0E4 1043 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 TXNIPQ9H3M7 391 aa20.56■□□□□ 0.88
VARS-217ENST00000440048 NAV3Q8IVL0 2385 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 CDC42EP2O14613 210 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 CRYAAP02489 173 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 CD79AP11912 226 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 ITGA2P17301 1181 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 ARR3P36575 388 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 SLC9A3P48764 834 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 MYBPC1Q00872 1141 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 ANKDD1AQ495B1 522 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 ZNF544Q6NX49 715 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 PIWIL3Q7Z3Z3 882 aaKnown RBP20.55■□□□□ 0.88
VARS-217ENST00000440048 IGFN1Q86VF2 1251 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 FBXL14Q8N1E6 418 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 BCAS4Q8TDM0 211 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 MCHR2Q969V1 340 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 NOX3Q9HBY0 568 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 DLL4Q9NR61 685 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 ZNF224Q9NZL3 707 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 STX18Q9P2W9 335 aaKnown RBP20.55■□□□□ 0.88
VARS-217ENST00000440048 TMEM5Q9Y2B1 443 aa20.55■□□□□ 0.88
VARS-217ENST00000440048 TRBV4-1A0A0J9YWV2 114 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 CALCRP30988 508 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 CTXN1P60606 82 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 PIGFQ07326 219 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 NPRL3Q12980 569 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 TOP3AQ13472 1001 aaPredicted RBP20.54■□□□□ 0.88
VARS-217ENST00000440048 TAF11Q15544 211 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 ARHGAP24Q8N264 748 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 MUC15Q8N387 334 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 HDAC2Q92769 488 aaKnown RBP20.54■□□□□ 0.88
VARS-217ENST00000440048 MCUR1Q96AQ8 359 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 CBLN4Q9NTU7 201 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 TMEM38BQ9NVV0 291 aa20.54■□□□□ 0.88
VARS-217ENST00000440048 ZNF346Q9UL40 294 aaKnown RBP20.54■□□□□ 0.88
VARS-217ENST00000440048 IGHMP01871 453 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 ATP6V1B2P21281 511 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 RPL27P61353 136 aaKnown RBP20.53■□□□□ 0.88
VARS-217ENST00000440048 SEC23BQ15437 767 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 GSG1Q2KHT4 349 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 C11orf71Q6IPW1 123 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 CYP2R1Q6VVX0 501 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 SKA3Q8IX90 412 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 SLC22A24Q8N4F4 322 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 OR52J3Q8NH60 311 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 NANOS1Q8WY41 292 aaKnown RBP20.53■□□□□ 0.88
VARS-217ENST00000440048 TRMT61AQ96FX7 289 aaKnown RBP20.53■□□□□ 0.88
VARS-217ENST00000440048 FAM46AQ96IP4 442 aaKnown RBP20.53■□□□□ 0.88
VARS-217ENST00000440048 Q96MF0 132 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 FUZQ9BT04 418 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 ACTR3BQ9P1U1 418 aa20.53■□□□□ 0.88
VARS-217ENST00000440048 APOBEC3AP31941 199 aaPredicted RBP20.52■□□□□ 0.88
VARS-217ENST00000440048 OMPP47874 163 aa20.52■□□□□ 0.88
VARS-217ENST00000440048 ZNF133P52736 654 aaPredicted RBP20.52■□□□□ 0.88
VARS-217ENST00000440048 ZBED5Q49AG3 693 aa20.52■□□□□ 0.88
VARS-217ENST00000440048 OR4K5Q8NGD3 323 aa20.52■□□□□ 0.88
VARS-217ENST00000440048 HTRA1Q92743 480 aa20.52■□□□□ 0.88
VARS-217ENST00000440048 NMD3Q96D46 503 aaKnown RBP20.52■□□□□ 0.88
VARS-217ENST00000440048 ZNF75AQ96N20 296 aa20.52■□□□□ 0.88
VARS-217ENST00000440048 KCNK17Q96T54 332 aa20.52■□□□□ 0.88
VARS-217ENST00000440048 IL1RAPQ9NPH3 570 aa20.52■□□□□ 0.88
VARS-217ENST00000440048 ARFGEF3Q5TH69 2177 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 PDE5AO76074 875 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 UBL3O95164 117 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 FABP3P05413 133 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 PATE4P0C8F1 98 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 OR8G3PP0DMU2 310 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 ZNF26P17031 533 aaPredicted RBP20.51■□□□□ 0.87
VARS-217ENST00000440048 ACVR1BP36896 505 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 LIMS1P48059 325 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 ZNF84P51523 738 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 SMIM11AP58511 58 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 RAB1AP62820 205 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 SPIBQ01892 262 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 C10orf128Q5T292 105 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 TRPM8Q7Z2W7 1104 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 FGFBP3Q8TAT2 258 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 ZNF519Q8TB69 540 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 TSPAN32Q96QS1 320 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 SH3GL3Q99963 347 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 TAS2R1Q9NYW7 299 aa20.51■□□□□ 0.87
VARS-217ENST00000440048 PRPF19Q9UMS4 504 aaKnown RBP20.51■□□□□ 0.87
VARS-217ENST00000440048 IGHV2OR16-5A0A0B4J2B6 119 aa20.5■□□□□ 0.87
VARS-217ENST00000440048 SH3PXD2BA1X283 911 aa20.5■□□□□ 0.87
VARS-217ENST00000440048 ENTPD5O75356 428 aa20.5■□□□□ 0.87
VARS-217ENST00000440048 GADD45GO95257 159 aa20.5■□□□□ 0.87
VARS-217ENST00000440048 SLC2A10O95528 541 aa20.5■□□□□ 0.87
VARS-217ENST00000440048 ZNF14P17017 642 aaPredicted RBP20.5■□□□□ 0.87
VARS-217ENST00000440048 GIPRP48546 466 aa20.5■□□□□ 0.87
VARS-217ENST00000440048 PTDSS1P48651 473 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms