RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 IGLV3-21P80748 117 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 IL10RAQ13651 578 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 KIAA0895LQ68EN5 471 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 GLDNQ6ZMI3 551 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 GPX7Q96SL4 187 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 GINS4Q9BRT9 223 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 MFRPQ9BY79 579 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 UBQLN2Q9UHD9 624 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 MMP17Q9ULZ9 603 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 MPZL1O95297 269 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 TGM6O95932 706 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 PNPP00491 289 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 IFNA7P01567 189 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 ITGA5P08648 1049 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 SPARCP09486 303 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 CXCR1P25024 350 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 EFNA3P52797 238 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 HSD17B7P56937 341 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 FNDC7Q5VTL7 733 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 C16orf47Q6ZP98 133 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 BPHLQ86WA6 291 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 TCTN2Q96GX1 697 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 SFXN2Q96NB2 322 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 INTS14Q96SY0 518 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 SLC19A3Q9BZV2 496 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 COMMD4Q9H0A8 199 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 PLEKHA1Q9HB21 404 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 NPDC1Q9NQX5 325 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 PRODH2Q9UF12 536 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 RP1P56715 2156 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 LINC00862A6NCI5 91 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF749O43361 778 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 CREBL2O60519 120 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 SLC16A7O60669 478 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 RBBP9O75884 186 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 RAB40ALP0C0E4 278 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 VSIG10L2P0DP72 767 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 MYF5P13349 255 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 KIR3DL2P43630 455 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 CAPZBP47756 277 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 SKP1P63208 163 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 BIKQ13323 160 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 OPCMLQ14982 345 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 SMUG1Q53HV7 270 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 OR7E24Q6IFN5 339 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 CDH24Q86UP0 819 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 OR4C16Q8NGL9 310 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 ANGPTL6Q8NI99 470 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 LRRC20Q8TCA0 184 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 RAB40AQ8WXH6 277 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 PHYHIPQ92561 330 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 OR11A1Q9GZK7 315 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 CHST6Q9GZX3 395 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 CNTRLQ7Z7A1 2325 aa12.26□□□□□ -0.45
HERPUD1-204ENST00000439977 A0A1B0GUH1 482 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 ARPC5O15511 151 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 CDC40O60508 579 aaKnown RBP eCLIP12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 RENP00797 406 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 CD1AP06126 327 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 POU3F4P49335 361 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 SLC25A1P53007 311 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 MELKQ14680 651 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 C1orf189Q5VU69 101 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 FAM71CQ8NEG0 241 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 RPS4Y2Q8TD47 263 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 GPR148Q8TDV2 347 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 METTL21AQ8WXB1 218 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 KLHL15Q96M94 604 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 MESP1Q9BRJ9 268 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 TAS2R5Q9NYW4 299 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 XKRYO14609 159 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 GLSO94925 669 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 CALCBP10092 127 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 RAB14P61106 215 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 CSRP2Q16527 193 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 TMEM205Q6UW68 189 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 OR51S1Q8NGJ8 323 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 TMEM138Q9NPI0 162 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 RDH8Q9NYR8 311 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 CDV3Q9UKY7 258 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 MOKQ9UQ07 419 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 NPTNQ9Y639 398 aa12.25□□□□□ -0.45
HERPUD1-204ENST00000439977 TRBV5-5A0A0J9YX44 114 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 L7N2F9 121 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 IL33O95760 270 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 GTF2F2P13984 249 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 MAPK3P27361 379 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 AP2S1P53680 142 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 H2BFSP57053 126 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 DMWDQ09019 674 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 ACKR1Q16570 336 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 ISXQ2M1V0 245 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 OR10K2Q6IF99 312 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 ALKAL2Q6UX46 152 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 KCTD20Q7Z5Y7 419 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 EVA1AQ9H8M9 152 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 STEAP1Q9UHE8 339 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 PLCL2Q9UPR0 1127 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 MAB21L2Q9Y586 359 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 PCDH15Q96QU1 1955 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms